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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
211.7
nTPM
GTEx:
211.7
nTPM
FANTOM5:
36.5
Scaled Tags Per Million
Pig:
82.7
nTPM
Mouse:
337.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
211.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 211.7
Samples: 105
Max nTPM: 328.1
Min nTPM: 47.4
Std nTPM: 52.7
Median nTPM:
177_1
74 years, male
328.1
377_1
82 years, female
302.4
266_1
85 years, male
299.6
386_1
76 years, male
291.2
319_1
81 years, male
288.4
335_1
73 years, female
280.2
115_1
83 years, male
279.5
189_1
76 years, male
279.3
153_1
70 years, female
274.1
246_1
77 years, male
271.0
425_1
59 years, female
269.9
4_1
88 years, female
268.4
394_1
75 years, female
266.4
6_1
73 years, female
264.8
163_1
78 years, male
263.9
172_1
72 years, female
263.4
292_1
71 years, male
262.4
243_1
75 years, male
262.1
503_1
68 years, male
260.4
9_1
66 years, female
255.2
376_1
75 years, female
255.2
389_1
86 years, female
252.9
265_1
87 years, male
250.1
353_1
82 years, female
249.7
406_1
79 years, male
249.1
18_1
88 years, male
248.5
322_1
76 years, male
246.9
404_1
82 years, female
246.6
126_1
63 years, male
245.8
229_1
69 years, female
244.6
518_1
75 years, female
243.3
354_1
81 years, female
243.2
356_1
87 years, female
243.1
286_1
68 years, female
240.0
351_1
91 years, male
240.0
145_1
84 years, male
239.6
384_1
83 years, male
237.5
109_1
81 years, female
236.0
526_1
61 years, male
233.1
162_1
79 years, female
232.6
237_1
82 years, male
231.9
447_1
81 years, male
231.2
293_1
68 years, female
230.9
468_1
89 years, male
230.3
405_1
91 years, male
228.9
396_1
62 years, male
228.7
350_1
84 years, female
227.7
506_1
65 years, male
227.2
251_1
78 years, male
226.7
35_1
74 years, female
225.2
120_1
70 years, female
223.3
517_1
88 years, male
222.6
318_1
68 years, male
219.5
324_1
76 years, male
218.2
142_1
61 years, female
217.7
254_1
77 years, female
217.7
137_1
83 years, male
217.5
17_1
71 years, male
216.7
316_1
62 years, male
215.3
379_1
60 years, male
213.8
375_1
74 years, female
213.6
264_1
73 years, female
211.4
352_1
62 years, male
209.0
2_1
77 years, female
208.9
173_1
67 years, male
208.2
117_1
61 years, male
207.7
321_1
62 years, female
206.6
313_1
79 years, female
206.4
499_1
55 years, female
203.9
349_1
83 years, male
203.1
452_1
88 years, female
201.1
480_1
63 years, male
197.9
355_1
70 years, female
193.3
288_1
66 years, female
192.7
317_1
60 years, male
188.9
315_1
62 years, female
183.7
99_1
64 years, male
183.4
217_1
76 years, male
182.4
320_1
89 years, female
182.2
81_1
67 years, male
177.4
291_1
76 years, male
174.4
314_1
67 years, male
170.3
311_1
78 years, male
168.6
295_1
61 years, female
166.7
218_1
71 years, female
164.6
43_1
64 years, female
164.2
139_1
64 years, female
164.1
41_1
94 years, female
163.0
495_1
57 years, female
147.3
32_1
67 years, male
146.6
501_1
88 years, male
144.9
348_1
84 years, male
144.8
415_1
77 years, female
142.5
414_1
84 years, female
140.3
42_1
85 years, male
133.6
347_1
72 years, male
130.5
466_1
57 years, female
129.9
307_1
66 years, female
128.6
119_1
70 years, female
126.6
89_1
63 years, male
123.5
308_1
70 years, female
116.8
149_1
88 years, male
108.1
413_1
59 years, female
86.5
491_1
89 years, female
58.4
490_1
67 years, female
47.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.