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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.1
nTPM
Monaco:
16.9
nTPM
Schmiedel:
48.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.1
HPA sample
nTPM
gdT-cell nTPM: 10.5
Samples: 6
Max nTPM: 14.0
Min nTPM: 6.5
P10809_1007
9.5
P10809_1022
8.8
P10809_1041
6.5
P10809_1060
12.2
P10809_1077
11.9
P10809_1098
14.0
MAIT T-cell nTPM: 12.7
Samples: 6
Max nTPM: 17.9
Min nTPM: 7.0
P10809_1006
11.6
P10809_1024
16.7
P10809_1043
14.5
P10809_1062
8.6
P10809_1083
7.0
P10809_1097
17.9
Memory CD4 T-cell nTPM: 14.4
Samples: 6
Max nTPM: 24.4
Min nTPM: 10.5
P10809_1014
10.5
P10809_1026
24.4
P10809_1045
11.3
P10809_1064
11.6
P10809_1086
13.3
P10809_1113
15.1
Memory CD8 T-cell nTPM: 15.2
Samples: 5
Max nTPM: 24.7
Min nTPM: 10.7
P10809_1012
10.7
P10809_1027
24.7
P10809_1046
11.2
P10809_1065
16.8
P10809_1111
12.8
Naive CD4 T-cell nTPM: 16.1
Samples: 6
Max nTPM: 19.7
Min nTPM: 11.2
P10809_1015
13.8
P10809_1030
19.1
P10809_1049
18.1
P10809_1068
14.7
P10809_1085
11.2
P10809_1112
19.7
Naive CD8 T-cell nTPM: 14.2
Samples: 6
Max nTPM: 16.5
Min nTPM: 12.4
P10809_1016
15.2
P10809_1031
15.2
P10809_1050
12.7
P10809_1069
13.4
P10809_1087
12.4
P10809_1110
16.5
T-reg nTPM: 15.5
Samples: 6
Max nTPM: 21.3
Min nTPM: 12.4
P10809_1018
12.7
P10809_1037
16.9
P10809_1056
12.6
P10809_1075
12.4
P10809_1094
16.9
P10809_1106
21.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 20.8
Min nTPM: 3.7
RHH5202_R3573
20.8
RHH5230_R3602
3.7
RHH5259_R3631
7.6
RHH5288_R3660
14.0
Effector memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 18.9
Min nTPM: 8.1
RHH5203_R3574
18.9
RHH5231_R3603
8.1
RHH5260_R3632
11.4
RHH5289_R3661
9.2
MAIT T-cell nTPM: 14.3
Samples: 4
Max nTPM: 19.6
Min nTPM: 9.1
RHH5233_R3605
9.1
RHH5205_R3576
14.1
RHH5262_R3634
19.6
RHH5297_R3663
14.5
Memory CD4 T-cell TFH nTPM: 8.3
Samples: 4
Max nTPM: 14.4
Min nTPM: 5.1
RHH5300_R3666
5.3
RHH5236_R3608
5.1
RHH5265_R3637
14.4
RHH5208_R3579
8.2
Memory CD4 T-cell Th1 nTPM: 14.0
Samples: 4
Max nTPM: 15.4
Min nTPM: 12.9
RHH5210_R3581
13.1
RHH5302_R3668
14.6
RHH5238_R3610
15.4
RHH5267_R3639
12.9
Memory CD4 T-cell Th1/Th17 nTPM: 12.0
Samples: 4
Max nTPM: 17.1
Min nTPM: 7.2
RHH5303_R3669
17.1
RHH5211_R3582
14.5
RHH5239_R3611
7.2
RHH5268_R3640
9.1
Memory CD4 T-cell Th17 nTPM: 15.8
Samples: 4
Max nTPM: 19.9
Min nTPM: 11.5
RHH5304_R3670
11.5
RHH5212_R3583
19.9
RHH5240_R3612
12.2
RHH5269_R3641
19.7
Memory CD4 T-cell Th2 nTPM: 12.8
Samples: 4
Max nTPM: 18.9
Min nTPM: 8.8
RHH5305_R3671
18.9
RHH5213_R3584
11.5
RHH5241_R3613
8.8
RHH5270_R3642
11.9
Naive CD4 T-cell nTPM: 15.5
Samples: 4
Max nTPM: 23.3
Min nTPM: 11.7
RHH5306_R3672
11.7
RHH5214_R3585
12.3
RHH5242_R3614
14.5
RHH5271_R3643
23.3
Naive CD8 T-cell nTPM: 16.9
Samples: 4
Max nTPM: 24.7
Min nTPM: 9.8
RHH5201_R3572
24.7
RHH5229_R3601
9.8
RHH5258_R3630
19.8
RHH5287_R3659
13.3
Non-Vd2 gdTCR nTPM: 15.2
Samples: 4
Max nTPM: 18.4
Min nTPM: 13.8
RHH5235_R3607
13.8
RHH5264_R3636
18.4
RHH5207_R3578
14.5
RHH5299_R3665
14.2
T-reg nTPM: 11.3
Samples: 4
Max nTPM: 16.4
Min nTPM: 8.5
RHH5301_R3667
8.5
RHH5237_R3609
8.5
RHH5266_R3638
16.4
RHH5209_R3580
11.9
Terminal effector memory CD4 T-cell nTPM: 10.0
Samples: 2
Max nTPM: 10.0
Min nTPM: 9.9
RHH5243_R3615
10.0
RHH5272_R3644
9.9
Terminal effector memory CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 15.5
Min nTPM: 7.8
RHH5232_R3604
15.1
RHH5204_R3575
15.5
RHH5261_R3633
15.2
RHH5296_R3662
7.8
Vd2 gdTCR nTPM: 13.9
Samples: 4
Max nTPM: 21.1
Min nTPM: 9.4
RHH5234_R3606
9.4
RHH5206_R3577
21.1
RHH5263_R3635
13.2
RHH5298_R3664
11.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
