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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.0
nTPM
Monaco:
144.6
nTPM
Schmiedel:
17.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.0
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 59.7
Min nTPM: 22.8
P10809_1007
30.1
P10809_1022
38.0
P10809_1041
59.7
P10809_1060
29.7
P10809_1077
22.8
P10809_1098
33.3
MAIT T-cell nTPM: 49.7
Samples: 6
Max nTPM: 66.3
Min nTPM: 38.9
P10809_1006
39.6
P10809_1024
66.3
P10809_1043
54.5
P10809_1062
54.2
P10809_1083
38.9
P10809_1097
44.9
Memory CD4 T-cell nTPM: 76.4
Samples: 6
Max nTPM: 98.7
Min nTPM: 49.8
P10809_1014
85.2
P10809_1026
92.8
P10809_1045
98.7
P10809_1064
54.5
P10809_1086
49.8
P10809_1113
77.3
Memory CD8 T-cell nTPM: 48.6
Samples: 5
Max nTPM: 56.7
Min nTPM: 33.7
P10809_1012
55.5
P10809_1027
53.8
P10809_1046
56.7
P10809_1065
33.7
P10809_1111
43.3
Naive CD4 T-cell nTPM: 58.6
Samples: 6
Max nTPM: 70.6
Min nTPM: 53.4
P10809_1015
55.0
P10809_1030
60.0
P10809_1049
70.6
P10809_1068
59.0
P10809_1085
53.5
P10809_1112
53.4
Naive CD8 T-cell nTPM: 45.2
Samples: 6
Max nTPM: 59.7
Min nTPM: 31.9
P10809_1016
59.7
P10809_1031
41.8
P10809_1050
49.3
P10809_1069
41.3
P10809_1087
31.9
P10809_1110
47.2
T-reg nTPM: 82.0
Samples: 6
Max nTPM: 108.2
Min nTPM: 49.6
P10809_1018
84.1
P10809_1037
97.4
P10809_1056
65.8
P10809_1075
108.2
P10809_1094
49.6
P10809_1106
86.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 128.5
Min nTPM: 81.2
RHH5202_R3573
128.5
RHH5230_R3602
111.2
RHH5259_R3631
81.2
RHH5288_R3660
103.5
Effector memory CD8 T-cell nTPM: 66.6
Samples: 4
Max nTPM: 94.4
Min nTPM: 43.4
RHH5203_R3574
94.4
RHH5231_R3603
43.4
RHH5260_R3632
48.4
RHH5289_R3661
80.1
MAIT T-cell nTPM: 85.2
Samples: 4
Max nTPM: 108.1
Min nTPM: 57.1
RHH5233_R3605
93.7
RHH5205_R3576
81.9
RHH5262_R3634
108.1
RHH5297_R3663
57.1
Memory CD4 T-cell TFH nTPM: 144.6
Samples: 4
Max nTPM: 167.8
Min nTPM: 99.3
RHH5300_R3666
147.7
RHH5236_R3608
167.8
RHH5265_R3637
163.5
RHH5208_R3579
99.3
Memory CD4 T-cell Th1 nTPM: 104.3
Samples: 4
Max nTPM: 131.8
Min nTPM: 71.1
RHH5210_R3581
111.2
RHH5302_R3668
131.8
RHH5238_R3610
71.1
RHH5267_R3639
103.1
Memory CD4 T-cell Th1/Th17 nTPM: 98.8
Samples: 4
Max nTPM: 140.8
Min nTPM: 30.0
RHH5303_R3669
126.6
RHH5211_R3582
140.8
RHH5239_R3611
30.0
RHH5268_R3640
97.9
Memory CD4 T-cell Th17 nTPM: 102.0
Samples: 4
Max nTPM: 138.6
Min nTPM: 85.4
RHH5304_R3670
138.6
RHH5212_R3583
86.0
RHH5240_R3612
98.0
RHH5269_R3641
85.4
Memory CD4 T-cell Th2 nTPM: 139.7
Samples: 4
Max nTPM: 173.4
Min nTPM: 121.7
RHH5305_R3671
121.7
RHH5213_R3584
122.1
RHH5241_R3613
173.4
RHH5270_R3642
141.7
Naive CD4 T-cell nTPM: 97.6
Samples: 4
Max nTPM: 114.4
Min nTPM: 89.5
RHH5306_R3672
114.4
RHH5214_R3585
90.1
RHH5242_R3614
96.5
RHH5271_R3643
89.5
Naive CD8 T-cell nTPM: 88.2
Samples: 4
Max nTPM: 125.4
Min nTPM: 37.8
RHH5201_R3572
125.4
RHH5229_R3601
37.8
RHH5258_R3630
101.1
RHH5287_R3659
88.4
Non-Vd2 gdTCR nTPM: 53.9
Samples: 4
Max nTPM: 71.5
Min nTPM: 22.0
RHH5235_R3607
22.0
RHH5264_R3636
69.9
RHH5207_R3578
71.5
RHH5299_R3665
52.0
T-reg nTPM: 99.3
Samples: 4
Max nTPM: 110.2
Min nTPM: 85.0
RHH5301_R3667
110.2
RHH5237_R3609
99.9
RHH5266_R3638
102.1
RHH5209_R3580
85.0
Terminal effector memory CD4 T-cell nTPM: 52.0
Samples: 2
Max nTPM: 64.2
Min nTPM: 39.8
RHH5243_R3615
39.8
RHH5272_R3644
64.2
Terminal effector memory CD8 T-cell nTPM: 58.1
Samples: 4
Max nTPM: 79.7
Min nTPM: 36.7
RHH5232_R3604
41.3
RHH5204_R3575
74.8
RHH5261_R3633
36.7
RHH5296_R3662
79.7
Vd2 gdTCR nTPM: 50.5
Samples: 4
Max nTPM: 53.6
Min nTPM: 43.3
RHH5234_R3606
53.5
RHH5206_R3577
43.3
RHH5263_R3635
51.7
RHH5298_R3664
53.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
