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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.2
nTPM
Monaco:
223.8
nTPM
Schmiedel:
145.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.2
HPA sample
nTPM
gdT-cell nTPM: 56.2
Samples: 6
Max nTPM: 69.3
Min nTPM: 43.1
P10809_1007
55.3
P10809_1022
64.1
P10809_1041
59.8
P10809_1060
45.7
P10809_1077
43.1
P10809_1098
69.3
MAIT T-cell nTPM: 46.0
Samples: 6
Max nTPM: 56.3
Min nTPM: 34.7
P10809_1006
40.1
P10809_1024
55.1
P10809_1043
34.7
P10809_1062
36.9
P10809_1083
52.9
P10809_1097
56.3
Memory CD4 T-cell nTPM: 45.2
Samples: 6
Max nTPM: 50.9
Min nTPM: 34.6
P10809_1014
42.1
P10809_1026
49.9
P10809_1045
34.6
P10809_1064
43.0
P10809_1086
50.8
P10809_1113
50.9
Memory CD8 T-cell nTPM: 55.9
Samples: 5
Max nTPM: 71.4
Min nTPM: 37.2
P10809_1012
52.2
P10809_1027
71.4
P10809_1046
37.2
P10809_1065
53.1
P10809_1111
65.6
Naive CD4 T-cell nTPM: 41.1
Samples: 6
Max nTPM: 51.0
Min nTPM: 34.1
P10809_1015
40.8
P10809_1030
48.8
P10809_1049
34.7
P10809_1068
34.1
P10809_1085
51.0
P10809_1112
37.2
Naive CD8 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 59.7
Min nTPM: 39.1
P10809_1016
39.1
P10809_1031
59.7
P10809_1050
44.1
P10809_1069
52.9
P10809_1087
54.5
P10809_1110
47.9
T-reg nTPM: 61.2
Samples: 6
Max nTPM: 77.9
Min nTPM: 50.0
P10809_1018
55.5
P10809_1037
71.5
P10809_1056
77.9
P10809_1075
55.6
P10809_1094
50.0
P10809_1106
56.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
223.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.4
Samples: 4
Max nTPM: 199.4
Min nTPM: 114.2
RHH5202_R3573
189.0
RHH5230_R3602
146.8
RHH5259_R3631
114.2
RHH5288_R3660
199.4
Effector memory CD8 T-cell nTPM: 223.8
Samples: 4
Max nTPM: 246.8
Min nTPM: 189.3
RHH5203_R3574
246.8
RHH5231_R3603
245.8
RHH5260_R3632
189.3
RHH5289_R3661
213.4
MAIT T-cell nTPM: 197.6
Samples: 4
Max nTPM: 239.7
Min nTPM: 165.8
RHH5233_R3605
165.8
RHH5205_R3576
188.9
RHH5262_R3634
239.7
RHH5297_R3663
195.9
Memory CD4 T-cell TFH nTPM: 155.0
Samples: 4
Max nTPM: 200.3
Min nTPM: 115.2
RHH5300_R3666
115.2
RHH5236_R3608
200.3
RHH5265_R3637
140.8
RHH5208_R3579
163.8
Memory CD4 T-cell Th1 nTPM: 157.0
Samples: 4
Max nTPM: 184.9
Min nTPM: 112.0
RHH5210_R3581
184.9
RHH5302_R3668
180.6
RHH5238_R3610
112.0
RHH5267_R3639
150.3
Memory CD4 T-cell Th1/Th17 nTPM: 181.0
Samples: 4
Max nTPM: 229.3
Min nTPM: 99.7
RHH5303_R3669
229.3
RHH5211_R3582
213.9
RHH5239_R3611
99.7
RHH5268_R3640
181.0
Memory CD4 T-cell Th17 nTPM: 130.6
Samples: 4
Max nTPM: 159.9
Min nTPM: 109.3
RHH5304_R3670
140.0
RHH5212_R3583
159.9
RHH5240_R3612
113.0
RHH5269_R3641
109.3
Memory CD4 T-cell Th2 nTPM: 172.0
Samples: 4
Max nTPM: 180.8
Min nTPM: 161.0
RHH5305_R3671
161.0
RHH5213_R3584
180.8
RHH5241_R3613
178.9
RHH5270_R3642
167.3
Naive CD4 T-cell nTPM: 157.4
Samples: 4
Max nTPM: 213.9
Min nTPM: 111.3
RHH5306_R3672
144.2
RHH5214_R3585
213.9
RHH5242_R3614
160.0
RHH5271_R3643
111.3
Naive CD8 T-cell nTPM: 132.9
Samples: 4
Max nTPM: 162.8
Min nTPM: 103.3
RHH5201_R3572
162.8
RHH5229_R3601
109.9
RHH5258_R3630
155.5
RHH5287_R3659
103.3
Non-Vd2 gdTCR nTPM: 178.5
Samples: 4
Max nTPM: 205.5
Min nTPM: 160.6
RHH5235_R3607
164.4
RHH5264_R3636
183.5
RHH5207_R3578
205.5
RHH5299_R3665
160.6
T-reg nTPM: 185.3
Samples: 4
Max nTPM: 220.2
Min nTPM: 170.2
RHH5301_R3667
178.9
RHH5237_R3609
220.2
RHH5266_R3638
171.9
RHH5209_R3580
170.2
Terminal effector memory CD4 T-cell nTPM: 174.3
Samples: 2
Max nTPM: 207.6
Min nTPM: 141.0
RHH5243_R3615
141.0
RHH5272_R3644
207.6
Terminal effector memory CD8 T-cell nTPM: 197.4
Samples: 4
Max nTPM: 244.4
Min nTPM: 163.6
RHH5232_R3604
178.0
RHH5204_R3575
244.4
RHH5261_R3633
163.6
RHH5296_R3662
203.5
Vd2 gdTCR nTPM: 198.6
Samples: 4
Max nTPM: 243.9
Min nTPM: 166.9
RHH5234_R3606
196.5
RHH5206_R3577
243.9
RHH5263_R3635
166.9
RHH5298_R3664
186.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
