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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
280.9
nTPM
Monaco:
419.5
nTPM
Schmiedel:
116.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
280.9
HPA sample
nTPM
gdT-cell nTPM: 281.0
Samples: 6
Max nTPM: 338.7
Min nTPM: 232.5
P10809_1007
246.7
P10809_1022
275.4
P10809_1041
329.8
P10809_1060
232.5
P10809_1077
262.6
P10809_1098
338.7
MAIT T-cell nTPM: 231.5
Samples: 6
Max nTPM: 279.6
Min nTPM: 171.9
P10809_1006
171.9
P10809_1024
207.5
P10809_1043
279.6
P10809_1062
253.1
P10809_1083
223.6
P10809_1097
253.0
Memory CD4 T-cell nTPM: 233.3
Samples: 6
Max nTPM: 300.7
Min nTPM: 179.6
P10809_1014
179.6
P10809_1026
218.7
P10809_1045
190.6
P10809_1064
263.4
P10809_1086
246.9
P10809_1113
300.7
Memory CD8 T-cell nTPM: 230.5
Samples: 5
Max nTPM: 306.4
Min nTPM: 183.8
P10809_1012
183.8
P10809_1027
192.0
P10809_1046
204.1
P10809_1065
306.4
P10809_1111
266.4
Naive CD4 T-cell nTPM: 162.5
Samples: 6
Max nTPM: 190.2
Min nTPM: 135.8
P10809_1015
135.8
P10809_1030
147.3
P10809_1049
168.8
P10809_1068
146.0
P10809_1085
186.7
P10809_1112
190.2
Naive CD8 T-cell nTPM: 218.8
Samples: 6
Max nTPM: 320.7
Min nTPM: 152.9
P10809_1016
152.9
P10809_1031
166.5
P10809_1050
231.5
P10809_1069
231.9
P10809_1087
320.7
P10809_1110
209.3
T-reg nTPM: 275.5
Samples: 6
Max nTPM: 369.5
Min nTPM: 240.1
P10809_1018
249.7
P10809_1037
243.5
P10809_1056
280.6
P10809_1075
240.1
P10809_1094
269.8
P10809_1106
369.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
419.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 253.8
Samples: 4
Max nTPM: 309.0
Min nTPM: 181.6
RHH5202_R3573
260.7
RHH5230_R3602
264.0
RHH5259_R3631
181.6
RHH5288_R3660
309.0
Effector memory CD8 T-cell nTPM: 359.8
Samples: 4
Max nTPM: 424.8
Min nTPM: 266.1
RHH5203_R3574
424.8
RHH5231_R3603
375.3
RHH5260_R3632
266.1
RHH5289_R3661
372.9
MAIT T-cell nTPM: 283.3
Samples: 4
Max nTPM: 320.1
Min nTPM: 257.1
RHH5233_R3605
320.1
RHH5205_R3576
257.1
RHH5262_R3634
291.5
RHH5297_R3663
264.3
Memory CD4 T-cell TFH nTPM: 257.9
Samples: 4
Max nTPM: 286.1
Min nTPM: 235.7
RHH5300_R3666
246.2
RHH5236_R3608
235.7
RHH5265_R3637
263.6
RHH5208_R3579
286.1
Memory CD4 T-cell Th1 nTPM: 264.7
Samples: 4
Max nTPM: 331.2
Min nTPM: 232.0
RHH5210_R3581
232.0
RHH5302_R3668
331.2
RHH5238_R3610
249.6
RHH5267_R3639
245.8
Memory CD4 T-cell Th1/Th17 nTPM: 251.1
Samples: 4
Max nTPM: 316.8
Min nTPM: 154.2
RHH5303_R3669
290.1
RHH5211_R3582
316.8
RHH5239_R3611
154.2
RHH5268_R3640
243.2
Memory CD4 T-cell Th17 nTPM: 273.4
Samples: 4
Max nTPM: 348.0
Min nTPM: 224.8
RHH5304_R3670
289.1
RHH5212_R3583
348.0
RHH5240_R3612
231.7
RHH5269_R3641
224.8
Memory CD4 T-cell Th2 nTPM: 313.2
Samples: 4
Max nTPM: 344.9
Min nTPM: 286.0
RHH5305_R3671
344.9
RHH5213_R3584
309.3
RHH5241_R3613
312.7
RHH5270_R3642
286.0
Naive CD4 T-cell nTPM: 192.3
Samples: 4
Max nTPM: 204.6
Min nTPM: 178.0
RHH5306_R3672
204.6
RHH5214_R3585
178.0
RHH5242_R3614
182.3
RHH5271_R3643
204.4
Naive CD8 T-cell nTPM: 190.7
Samples: 4
Max nTPM: 242.0
Min nTPM: 86.3
RHH5201_R3572
242.0
RHH5229_R3601
86.3
RHH5258_R3630
232.7
RHH5287_R3659
201.6
Non-Vd2 gdTCR nTPM: 398.0
Samples: 4
Max nTPM: 444.4
Min nTPM: 328.5
RHH5235_R3607
328.5
RHH5264_R3636
393.1
RHH5207_R3578
425.9
RHH5299_R3665
444.4
T-reg nTPM: 220.3
Samples: 4
Max nTPM: 281.2
Min nTPM: 182.8
RHH5301_R3667
281.2
RHH5237_R3609
186.5
RHH5266_R3638
230.6
RHH5209_R3580
182.8
Terminal effector memory CD4 T-cell nTPM: 367.7
Samples: 2
Max nTPM: 398.1
Min nTPM: 337.2
RHH5243_R3615
337.2
RHH5272_R3644
398.1
Terminal effector memory CD8 T-cell nTPM: 419.5
Samples: 4
Max nTPM: 481.8
Min nTPM: 325.9
RHH5232_R3604
424.4
RHH5204_R3575
481.8
RHH5261_R3633
325.9
RHH5296_R3662
445.9
Vd2 gdTCR nTPM: 349.7
Samples: 4
Max nTPM: 493.1
Min nTPM: 244.0
RHH5234_R3606
343.6
RHH5206_R3577
493.1
RHH5263_R3635
244.0
RHH5298_R3664
318.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.