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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
301.9
nTPM
Monaco:
2428.4
nTPM
Schmiedel:
27.2
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.9
HPA sample
nTPM
Memory B-cell nTPM: 301.9
Samples: 6
Max nTPM: 451.6
Min nTPM: 103.1
P10809_1017
353.9
P10809_1025
451.6
P10809_1044
256.2
P10809_1063
241.0
P10809_1092
405.5
P10809_1105
103.1
Naive B-cell nTPM: 299.3
Samples: 6
Max nTPM: 1166.9
Min nTPM: 45.2
P10809_1011
45.2
P10809_1029
136.6
P10809_1048
1166.9
P10809_1067
154.3
P10809_1091
188.1
P10809_1104
104.7
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2428.4
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 163.4
Samples: 4
Max nTPM: 320.4
Min nTPM: 71.8
RHH5310_R3677
320.4
RHH5218_R3590
71.8
RHH5247_R3619
185.8
RHH5276_R3648
75.7
Naive B-cell nTPM: 67.3
Samples: 4
Max nTPM: 96.7
Min nTPM: 42.0
RHH5308_R3675
83.6
RHH5216_R3588
96.7
RHH5245_R3617
47.0
RHH5274_R3646
42.0
Non-switched memory B-cell nTPM: 102.8
Samples: 4
Max nTPM: 170.2
Min nTPM: 32.6
RHH5309_R3676
170.2
RHH5217_R3589
82.5
RHH5246_R3618
125.8
RHH5275_R3647
32.6
Plasmablast nTPM: 2428.4
Samples: 4
Max nTPM: 3430.8
Min nTPM: 1086.2
RHH5312_R3679
1865.8
RHH5220_R3592
3330.8
RHH5249_R3621
3430.8
RHH5278_R3650
1086.2
Switched memory B-cell nTPM: 105.6
Samples: 4
Max nTPM: 182.4
Min nTPM: 45.7
RHH5311_R3678
182.4
RHH5219_R3591
110.7
RHH5248_R3620
83.5
RHH5277_R3649
45.7
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
