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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
587.1
nTPM
Monaco:
185.6
nTPM
Schmiedel:
80.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
587.1
HPA sample
nTPM
gdT-cell nTPM: 336.8
Samples: 6
Max nTPM: 472.3
Min nTPM: 278.2
P10809_1007
278.2
P10809_1022
329.9
P10809_1041
472.3
P10809_1060
300.8
P10809_1077
338.2
P10809_1098
301.2
MAIT T-cell nTPM: 401.8
Samples: 6
Max nTPM: 539.5
Min nTPM: 261.8
P10809_1006
261.8
P10809_1024
539.5
P10809_1043
403.1
P10809_1062
378.2
P10809_1083
374.5
P10809_1097
453.7
Memory CD4 T-cell nTPM: 440.9
Samples: 6
Max nTPM: 542.2
Min nTPM: 383.1
P10809_1014
383.1
P10809_1026
469.3
P10809_1045
542.2
P10809_1064
431.4
P10809_1086
394.6
P10809_1113
424.5
Memory CD8 T-cell nTPM: 404.9
Samples: 5
Max nTPM: 474.3
Min nTPM: 314.5
P10809_1012
314.5
P10809_1027
474.3
P10809_1046
422.4
P10809_1065
415.2
P10809_1111
398.2
Naive CD4 T-cell nTPM: 542.7
Samples: 6
Max nTPM: 680.0
Min nTPM: 441.1
P10809_1015
441.1
P10809_1030
618.6
P10809_1049
680.0
P10809_1068
599.6
P10809_1085
450.3
P10809_1112
466.6
Naive CD8 T-cell nTPM: 460.8
Samples: 6
Max nTPM: 534.2
Min nTPM: 354.9
P10809_1016
459.1
P10809_1031
472.9
P10809_1050
534.2
P10809_1069
498.1
P10809_1087
354.9
P10809_1110
445.6
T-reg nTPM: 587.1
Samples: 6
Max nTPM: 764.3
Min nTPM: 409.9
P10809_1018
409.9
P10809_1037
764.3
P10809_1056
579.8
P10809_1075
597.2
P10809_1094
580.7
P10809_1106
590.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 129.5
Samples: 4
Max nTPM: 180.5
Min nTPM: 84.9
RHH5202_R3573
84.9
RHH5230_R3602
114.8
RHH5259_R3631
137.7
RHH5288_R3660
180.5
Effector memory CD8 T-cell nTPM: 109.8
Samples: 4
Max nTPM: 122.7
Min nTPM: 88.2
RHH5203_R3574
122.7
RHH5231_R3603
118.8
RHH5260_R3632
109.4
RHH5289_R3661
88.2
MAIT T-cell nTPM: 119.4
Samples: 4
Max nTPM: 160.3
Min nTPM: 102.2
RHH5233_R3605
102.2
RHH5205_R3576
102.3
RHH5262_R3634
112.7
RHH5297_R3663
160.3
Memory CD4 T-cell TFH nTPM: 153.7
Samples: 4
Max nTPM: 240.4
Min nTPM: 107.7
RHH5300_R3666
143.7
RHH5236_R3608
240.4
RHH5265_R3637
107.7
RHH5208_R3579
123.0
Memory CD4 T-cell Th1 nTPM: 179.3
Samples: 4
Max nTPM: 300.2
Min nTPM: 106.2
RHH5210_R3581
106.2
RHH5302_R3668
300.2
RHH5238_R3610
168.4
RHH5267_R3639
142.2
Memory CD4 T-cell Th1/Th17 nTPM: 148.0
Samples: 4
Max nTPM: 199.9
Min nTPM: 122.6
RHH5303_R3669
199.9
RHH5211_R3582
140.0
RHH5239_R3611
122.6
RHH5268_R3640
129.4
Memory CD4 T-cell Th17 nTPM: 123.3
Samples: 4
Max nTPM: 146.8
Min nTPM: 102.2
RHH5304_R3670
138.9
RHH5212_R3583
146.8
RHH5240_R3612
105.2
RHH5269_R3641
102.2
Memory CD4 T-cell Th2 nTPM: 139.4
Samples: 4
Max nTPM: 178.3
Min nTPM: 103.0
RHH5305_R3671
178.3
RHH5213_R3584
120.6
RHH5241_R3613
155.8
RHH5270_R3642
103.0
Naive CD4 T-cell nTPM: 185.6
Samples: 4
Max nTPM: 262.9
Min nTPM: 128.6
RHH5306_R3672
221.6
RHH5214_R3585
262.9
RHH5242_R3614
128.6
RHH5271_R3643
129.3
Naive CD8 T-cell nTPM: 158.0
Samples: 4
Max nTPM: 195.7
Min nTPM: 101.5
RHH5201_R3572
101.5
RHH5229_R3601
176.4
RHH5258_R3630
158.4
RHH5287_R3659
195.7
Non-Vd2 gdTCR nTPM: 120.1
Samples: 4
Max nTPM: 184.2
Min nTPM: 82.2
RHH5235_R3607
82.2
RHH5264_R3636
126.5
RHH5207_R3578
87.5
RHH5299_R3665
184.2
T-reg nTPM: 182.3
Samples: 4
Max nTPM: 250.6
Min nTPM: 136.6
RHH5301_R3667
250.6
RHH5237_R3609
172.9
RHH5266_R3638
136.6
RHH5209_R3580
169.1
Terminal effector memory CD4 T-cell nTPM: 105.0
Samples: 2
Max nTPM: 123.6
Min nTPM: 86.4
RHH5243_R3615
86.4
RHH5272_R3644
123.6
Terminal effector memory CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 285.6
Min nTPM: 90.7
RHH5232_R3604
90.7
RHH5204_R3575
285.6
RHH5261_R3633
123.3
RHH5296_R3662
148.7
Vd2 gdTCR nTPM: 155.7
Samples: 4
Max nTPM: 259.6
Min nTPM: 83.8
RHH5234_R3606
83.8
RHH5206_R3577
259.6
RHH5263_R3635
103.1
RHH5298_R3664
176.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
