HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:110.1 nTPM
HPA Brain:41.2 nTPM
GTEx:110.1 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Pig:23.4 nTPM
Mouse:116.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066872
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 37.0
1898 Male, age 80, left hemisphere 48.4
2529 Female, age 94, left hemisphere 44.3
2621 Female, age 67, right hemisphere 36.0
1911 Female, age 85, right hemisphere 34.2
1855 Male, age 76, left hemisphere 30.6
2148 Female, age 91, left hemisphere 28.5
Dentate gyrus
nTPM: 35.1
2010 Male, age 76, both hemispheres 41.3
2530 Female, age 94, left hemisphere 37.0
1927 Female, age 91, both hemispheres 35.9
2246 Female, age 85, both hemispheres 33.3
2528 Male, age 74, both hemispheres 32.3
2531 Female, age 67, both hemispheres 31.0
Entorhinal gyrus
nTPM: 33.6
1938 Female, age 85, left hemisphere 39.4
1787 Male, age 76, left hemisphere 37.8
2117 Female, age 91, right hemisphere 36.0
2764 Male, age 80, right hemisphere 34.7
2686 Male, age 75, right hemisphere 29.3
2613 Female, age 94, left hemisphere 24.5
Hippocampus, CA1
nTPM: 41.2
2749 Male, age 80, left hemisphere 55.5
2045 Male, age 76, both hemispheres 44.4
1873 Female, age 85, both hemispheres 39.1
2527 Male, age 74, both hemispheres 36.8
2082 Female, age 91, right hemisphere 30.4
Hippocampus, CA2
nTPM: 35.5
1892 Male, age 76, both hemispheres 46.9
2249 Male, age 74, both hemispheres 40.0
1963 Male, age 80, left hemisphere 32.6
2437 Female, age 94, left hemisphere 32.6
1940 Female, age 85, left hemisphere 30.9
2113 Female, age 91, right hemisphere 30.2
Hippocampus, CA3
nTPM: 39.6
1867 Male, age 76, both hemispheres 50.8
2137 Male, age 80, left hemisphere 42.9
1891 Female, age 85, both hemispheres 42.4
2436 Male, age 74, both hemispheres 39.9
2620 Female, age 94, left hemisphere 34.7
2861 Female, age 67, both hemispheres 27.0
Parahippocampal cortex
nTPM: 34.8
2245 Female, age 91, both hemispheres 41.0
2018 Male, age 76, both hemispheres 39.8
1850 Male, age 80, both hemispheres 38.3
2532 Female, age 72, left hemisphere 36.1
1990 Female, age 91, right hemisphere 35.8
2250 Female, age 67, right hemisphere 35.5
1933 Female, age 85, both hemispheres 34.2
2693 Female, age 94, both hemispheres 33.9
2622 Female, age 67, right hemisphere 28.3
2692 Male, age 74, both hemispheres 25.4
Perirhinal gyrus
nTPM: 40.5
1794 Male, age 80, right hemisphere 47.5
1841 Female, age 85, right hemisphere 42.5
2848 Male, age 76, right hemisphere 39.5
1847 Female, age 91, left hemisphere 37.3
2521 Female, age 94, right hemisphere 35.7
Subiculum
nTPM: 34.7
1901 Male, age 80, both hemispheres 43.2
1977 Female, age 85, both hemispheres 40.6
2042 Male, age 76, both hemispheres 38.5
2619 Male, age 74, both hemispheres 31.7
2438 Female, age 94, left hemisphere 27.6
2729 Female, age 91, right hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.1
Samples: 197

Max nTPM: 333.3
Min nTPM: 60.1
Std nTPM: 33.5
Median nTPM: 103.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 333.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 230.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 227.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 197.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 190.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 188.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 180.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 168.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 168.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 167.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 164.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.1
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 71.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.4
Pig sample Sample description nTPM
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.4
Sample A Female 22.1
Sample B Female 17.0
Sample C Male 15.7
Sample D Male 15.4
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 16.8
Sample A Female 31.2
Sample B Female 19.7
Sample C Male 25.9
Sample D Male 16.8
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 14.7
Sample A Female 18.1
Sample B Female 26.6
Sample C Male 18.8
Sample D Male 14.7
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 22.2
Min nTPM: 17.7
Sample A Female 22.2
Sample B Female 18.2
Sample C Male 17.7
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 114.4
Min nTPM: 105.1
Sample A Male 106.6
Sample B Male 114.4
Sample C Female 111.6
Sample D Female 105.1
Hippocampal formation
nTPM: 116.4
Samples: 4

Max nTPM: 146.0
Min nTPM: 99.0
Sample A Male 146.0
Sample B Male 99.0
Sample C Female 107.5
Sample D Female 113.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69116817 Antisense, RP_050321_01_C03, Mouse strain C57BL/6J (56 days, male) 0.1

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