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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
175.7
nTPM
Monaco:
63.3
nTPM
Schmiedel:
78.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.7
HPA sample
nTPM
gdT-cell nTPM: 127.2
Samples: 6
Max nTPM: 155.5
Min nTPM: 98.5
P10809_1007
99.8
P10809_1022
98.5
P10809_1041
131.5
P10809_1060
155.5
P10809_1077
150.4
P10809_1098
127.2
MAIT T-cell nTPM: 137.2
Samples: 6
Max nTPM: 155.9
Min nTPM: 113.3
P10809_1006
113.3
P10809_1024
149.6
P10809_1043
129.3
P10809_1062
155.9
P10809_1083
126.3
P10809_1097
148.8
Memory CD4 T-cell nTPM: 144.4
Samples: 6
Max nTPM: 189.4
Min nTPM: 96.5
P10809_1014
111.8
P10809_1026
171.1
P10809_1045
96.5
P10809_1064
133.7
P10809_1086
189.4
P10809_1113
163.6
Memory CD8 T-cell nTPM: 135.6
Samples: 5
Max nTPM: 175.3
Min nTPM: 101.6
P10809_1012
101.6
P10809_1027
175.3
P10809_1046
105.5
P10809_1065
145.1
P10809_1111
150.7
Naive CD4 T-cell nTPM: 121.9
Samples: 6
Max nTPM: 162.7
Min nTPM: 79.4
P10809_1015
124.3
P10809_1030
162.7
P10809_1049
79.4
P10809_1068
131.2
P10809_1085
97.2
P10809_1112
136.5
Naive CD8 T-cell nTPM: 147.8
Samples: 6
Max nTPM: 186.8
Min nTPM: 109.0
P10809_1016
146.0
P10809_1031
154.9
P10809_1050
109.0
P10809_1069
157.6
P10809_1087
186.8
P10809_1110
132.4
T-reg nTPM: 175.7
Samples: 6
Max nTPM: 237.0
Min nTPM: 104.5
P10809_1018
134.6
P10809_1037
204.3
P10809_1056
104.5
P10809_1075
237.0
P10809_1094
192.5
P10809_1106
181.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 51.6
Samples: 4
Max nTPM: 88.2
Min nTPM: 25.8
RHH5202_R3573
25.8
RHH5230_R3602
55.4
RHH5259_R3631
88.2
RHH5288_R3660
37.1
Effector memory CD8 T-cell nTPM: 37.2
Samples: 4
Max nTPM: 62.7
Min nTPM: 25.7
RHH5203_R3574
25.7
RHH5231_R3603
29.7
RHH5260_R3632
62.7
RHH5289_R3661
30.5
MAIT T-cell nTPM: 54.4
Samples: 4
Max nTPM: 70.6
Min nTPM: 37.0
RHH5233_R3605
56.8
RHH5205_R3576
70.6
RHH5262_R3634
37.0
RHH5297_R3663
53.0
Memory CD4 T-cell TFH nTPM: 35.9
Samples: 4
Max nTPM: 50.6
Min nTPM: 21.3
RHH5300_R3666
50.6
RHH5236_R3608
40.5
RHH5265_R3637
21.3
RHH5208_R3579
31.1
Memory CD4 T-cell Th1 nTPM: 51.3
Samples: 4
Max nTPM: 68.8
Min nTPM: 30.8
RHH5210_R3581
30.8
RHH5302_R3668
52.8
RHH5238_R3610
52.9
RHH5267_R3639
68.8
Memory CD4 T-cell Th1/Th17 nTPM: 44.6
Samples: 4
Max nTPM: 57.6
Min nTPM: 32.9
RHH5303_R3669
32.9
RHH5211_R3582
35.3
RHH5239_R3611
52.6
RHH5268_R3640
57.6
Memory CD4 T-cell Th17 nTPM: 42.7
Samples: 4
Max nTPM: 61.6
Min nTPM: 33.9
RHH5304_R3670
61.6
RHH5212_R3583
33.9
RHH5240_R3612
37.4
RHH5269_R3641
37.9
Memory CD4 T-cell Th2 nTPM: 41.5
Samples: 4
Max nTPM: 51.2
Min nTPM: 27.5
RHH5305_R3671
41.4
RHH5213_R3584
46.0
RHH5241_R3613
51.2
RHH5270_R3642
27.5
Naive CD4 T-cell nTPM: 43.0
Samples: 4
Max nTPM: 54.5
Min nTPM: 23.3
RHH5306_R3672
41.1
RHH5214_R3585
54.5
RHH5242_R3614
23.3
RHH5271_R3643
52.9
Naive CD8 T-cell nTPM: 43.2
Samples: 4
Max nTPM: 71.7
Min nTPM: 13.3
RHH5201_R3572
13.3
RHH5229_R3601
71.7
RHH5258_R3630
18.1
RHH5287_R3659
69.7
Non-Vd2 gdTCR nTPM: 48.5
Samples: 4
Max nTPM: 65.4
Min nTPM: 33.8
RHH5235_R3607
65.4
RHH5264_R3636
55.2
RHH5207_R3578
39.5
RHH5299_R3665
33.8
T-reg nTPM: 46.1
Samples: 4
Max nTPM: 60.5
Min nTPM: 35.1
RHH5301_R3667
50.7
RHH5237_R3609
35.1
RHH5266_R3638
37.9
RHH5209_R3580
60.5
Terminal effector memory CD4 T-cell nTPM: 35.3
Samples: 2
Max nTPM: 45.9
Min nTPM: 24.7
RHH5243_R3615
45.9
RHH5272_R3644
24.7
Terminal effector memory CD8 T-cell nTPM: 54.2
Samples: 4
Max nTPM: 79.7
Min nTPM: 21.2
RHH5232_R3604
46.8
RHH5204_R3575
79.7
RHH5261_R3633
68.9
RHH5296_R3662
21.2
Vd2 gdTCR nTPM: 63.3
Samples: 4
Max nTPM: 108.4
Min nTPM: 37.7
RHH5234_R3606
37.7
RHH5206_R3577
108.4
RHH5263_R3635
57.4
RHH5298_R3664
49.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
