HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:59.4 nTPM
HPA Brain:56.1 nTPM
GTEx:59.4 nTPM
FANTOM5:167.3 Scaled Tags Per Million
Mouse:93.7 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002859Antibody CAB011655
Glial cells Not detectedLow
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.1
Sample id Sample description nTPM
Hippocampus
nTPM: 55.3
2529 Female, age 94, left hemisphere 58.7
1898 Male, age 80, left hemisphere 58.5
2621 Female, age 67, right hemisphere 55.7
1855 Male, age 76, left hemisphere 55.5
2148 Female, age 91, left hemisphere 55.1
1911 Female, age 85, right hemisphere 48.2
Dentate gyrus
nTPM: 56.1
2530 Female, age 94, left hemisphere 66.9
2246 Female, age 85, both hemispheres 59.1
2528 Male, age 74, both hemispheres 58.0
2010 Male, age 76, both hemispheres 57.9
1927 Female, age 91, both hemispheres 48.4
2531 Female, age 67, both hemispheres 46.5
Entorhinal gyrus
nTPM: 53.8
2117 Female, age 91, right hemisphere 63.3
2764 Male, age 80, right hemisphere 56.7
1938 Female, age 85, left hemisphere 55.6
2613 Female, age 94, left hemisphere 55.1
1787 Male, age 76, left hemisphere 52.7
2686 Male, age 75, right hemisphere 39.4
Hippocampus, CA1
nTPM: 54.8
2749 Male, age 80, left hemisphere 74.9
2527 Male, age 74, both hemispheres 56.1
1873 Female, age 85, both hemispheres 54.1
2045 Male, age 76, both hemispheres 49.0
2082 Female, age 91, right hemisphere 40.1
Hippocampus, CA2
nTPM: 53.1
1963 Male, age 80, left hemisphere 60.9
1892 Male, age 76, both hemispheres 56.0
2249 Male, age 74, both hemispheres 55.9
2437 Female, age 94, left hemisphere 52.9
1940 Female, age 85, left hemisphere 48.4
2113 Female, age 91, right hemisphere 44.4
Hippocampus, CA3
nTPM: 54.2
2620 Female, age 94, left hemisphere 61.1
2137 Male, age 80, left hemisphere 60.3
2436 Male, age 74, both hemispheres 56.5
1867 Male, age 76, both hemispheres 49.9
2861 Female, age 67, both hemispheres 49.3
1891 Female, age 85, both hemispheres 48.2
Parahippocampal cortex
nTPM: 48.9
2245 Female, age 91, both hemispheres 62.3
2532 Female, age 72, left hemisphere 54.7
2692 Male, age 74, both hemispheres 51.0
1933 Female, age 85, both hemispheres 50.6
1990 Female, age 91, right hemisphere 50.6
1850 Male, age 80, both hemispheres 48.2
2250 Female, age 67, right hemisphere 47.9
2018 Male, age 76, both hemispheres 42.4
2693 Female, age 94, both hemispheres 41.8
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 51.9
1794 Male, age 80, right hemisphere 58.3
2521 Female, age 94, right hemisphere 57.2
1847 Female, age 91, left hemisphere 51.3
1841 Female, age 85, right hemisphere 47.5
2848 Male, age 76, right hemisphere 45.0
Subiculum
nTPM: 50.2
1901 Male, age 80, both hemispheres 55.8
2619 Male, age 74, both hemispheres 54.2
1977 Female, age 85, both hemispheres 52.9
2438 Female, age 94, left hemisphere 48.6
2042 Male, age 76, both hemispheres 46.2
2729 Female, age 91, right hemisphere 43.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.4
Samples: 197

Max nTPM: 110.2
Min nTPM: 31.4
Std nTPM: 16.1
Median nTPM: 57.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 110.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 106.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 104.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 100.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 99.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 99.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 97.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 96.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 95.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 94.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.3
FF:10169-103B7 60 years, female 201.4
FF:10153-102I9 76 years, female 133.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 99.2
Min nTPM: 83.8
Sample A Male 86.9
Sample B Male 83.8
Sample C Female 89.3
Sample D Female 99.2
Hippocampal formation
nTPM: 93.7
Samples: 4

Max nTPM: 98.6
Min nTPM: 91.8
Sample A Male 91.8
Sample B Male 92.5
Sample C Female 98.6
Sample D Female 91.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
69549607 Antisense, RP_050203_01_F11, Mouse strain C57BL/6J (56 days, male) 7.2

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