HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:277.8 nTPM
HPA Brain:149.7 nTPM
GTEx:277.8 nTPM
FANTOM5:109.8 Scaled Tags Per Million
Pig:133.5 nTPM
Mouse:165.6 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041113
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 149.7
Sample id Sample description nTPM
Hippocampus
nTPM: 134.9
1898 Male, age 80, left hemisphere 172.0
1855 Male, age 76, left hemisphere 138.8
2529 Female, age 94, left hemisphere 133.5
2621 Female, age 67, right hemisphere 132.5
1911 Female, age 85, right hemisphere 123.5
2148 Female, age 91, left hemisphere 109.2
Dentate gyrus
nTPM: 125.3
2530 Female, age 94, left hemisphere 159.3
2010 Male, age 76, both hemispheres 148.8
1927 Female, age 91, both hemispheres 121.7
2246 Female, age 85, both hemispheres 110.9
2531 Female, age 67, both hemispheres 109.8
2528 Male, age 74, both hemispheres 101.5
Entorhinal gyrus
nTPM: 114.9
1787 Male, age 76, left hemisphere 129.8
2117 Female, age 91, right hemisphere 116.3
2764 Male, age 80, right hemisphere 115.0
1938 Female, age 85, left hemisphere 114.0
2686 Male, age 75, right hemisphere 113.9
2613 Female, age 94, left hemisphere 100.5
Hippocampus, CA1
nTPM: 138.7
2749 Male, age 80, left hemisphere 201.8
2045 Male, age 76, both hemispheres 130.9
2527 Male, age 74, both hemispheres 127.6
1873 Female, age 85, both hemispheres 117.8
2082 Female, age 91, right hemisphere 115.7
Hippocampus, CA2
nTPM: 135.2
1892 Male, age 76, both hemispheres 151.4
2249 Male, age 74, both hemispheres 148.8
1963 Male, age 80, left hemisphere 141.7
2437 Female, age 94, left hemisphere 141.1
1940 Female, age 85, left hemisphere 124.1
2113 Female, age 91, right hemisphere 104.0
Hippocampus, CA3
nTPM: 149.7
2436 Male, age 74, both hemispheres 248.6
1867 Male, age 76, both hemispheres 159.2
2137 Male, age 80, left hemisphere 155.1
2861 Female, age 67, both hemispheres 120.4
1891 Female, age 85, both hemispheres 115.8
2620 Female, age 94, left hemisphere 99.4
Parahippocampal cortex
nTPM: 115.3
2018 Male, age 76, both hemispheres 152.4
2250 Female, age 67, right hemisphere 134.5
1850 Male, age 80, both hemispheres 126.3
2245 Female, age 91, both hemispheres 124.4
1990 Female, age 91, right hemisphere 113.2
1933 Female, age 85, both hemispheres 108.2
2622 Female, age 67, right hemisphere 103.9
2532 Female, age 72, left hemisphere 102.0
2692 Male, age 74, both hemispheres 95.5
2693 Female, age 94, both hemispheres 92.6
Perirhinal gyrus
nTPM: 129.1
1847 Female, age 91, left hemisphere 147.8
1794 Male, age 80, right hemisphere 138.5
2521 Female, age 94, right hemisphere 126.7
1841 Female, age 85, right hemisphere 124.6
2848 Male, age 76, right hemisphere 108.0
Subiculum
nTPM: 126.4
1901 Male, age 80, both hemispheres 137.9
2042 Male, age 76, both hemispheres 136.9
2438 Female, age 94, left hemisphere 133.0
1977 Female, age 85, both hemispheres 129.2
2729 Female, age 91, right hemisphere 112.2
2619 Male, age 74, both hemispheres 109.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 277.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 277.8
Samples: 197

Max nTPM: 723.5
Min nTPM: 140.7
Std nTPM: 82.7
Median nTPM: 263.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 723.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 570.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 564.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 501.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 498.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 476.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 450.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 446.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 422.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 404.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 403.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.8
FF:10169-103B7 60 years, female 119.4
FF:10153-102I9 76 years, female 100.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 133.5
Pig sample Sample description nTPM
Subiculum
nTPM: 123.4
Samples: 4

Max nTPM: 159.7
Min nTPM: 102.0
Sample A Female 159.7
Sample B Female 122.3
Sample C Male 102.0
Sample D Male 109.6
Dorsal hippocampus
nTPM: 132.8
Samples: 4

Max nTPM: 184.5
Min nTPM: 84.6
Sample A Female 184.5
Sample B Female 124.7
Sample C Male 137.4
Sample D Male 84.6
Entorhinal cortex
nTPM: 130.7
Samples: 4

Max nTPM: 159.9
Min nTPM: 91.6
Sample A Female 121.6
Sample B Female 159.9
Sample C Male 149.5
Sample D Male 91.6
Ventral hippocampus
nTPM: 133.5
Samples: 4

Max nTPM: 156.3
Min nTPM: 106.2
Sample A Female 146.5
Sample B Female 106.2
Sample C Male 156.3
Sample D Male 124.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 165.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 152.0
Samples: 4

Max nTPM: 169.4
Min nTPM: 139.8
Sample A Male 152.1
Sample B Male 146.5
Sample C Female 169.4
Sample D Female 139.8
Hippocampal formation
nTPM: 165.6
Samples: 4

Max nTPM: 180.4
Min nTPM: 150.8
Sample A Male 180.4
Sample B Male 155.4
Sample C Female 150.8
Sample D Female 175.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
69782276 Antisense, RP_050505_02_F07, Mouse strain C57BL/6J (56 days, male) 7.2

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