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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
236.1
nTPM
Monaco:
135.0
nTPM
Schmiedel:
11.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.1
HPA sample
nTPM
gdT-cell nTPM: 167.2
Samples: 6
Max nTPM: 220.3
Min nTPM: 107.9
P10809_1007
107.9
P10809_1022
195.9
P10809_1041
220.3
P10809_1060
142.3
P10809_1077
165.2
P10809_1098
171.8
MAIT T-cell nTPM: 236.2
Samples: 6
Max nTPM: 341.2
Min nTPM: 150.4
P10809_1006
150.4
P10809_1024
240.2
P10809_1043
290.5
P10809_1062
211.3
P10809_1083
183.3
P10809_1097
341.2
Memory CD4 T-cell nTPM: 212.6
Samples: 6
Max nTPM: 267.6
Min nTPM: 150.9
P10809_1014
153.1
P10809_1026
267.6
P10809_1045
264.5
P10809_1064
150.9
P10809_1086
172.1
P10809_1113
267.5
Memory CD8 T-cell nTPM: 183.4
Samples: 5
Max nTPM: 237.6
Min nTPM: 126.9
P10809_1012
126.9
P10809_1027
176.2
P10809_1046
237.6
P10809_1065
144.2
P10809_1111
231.9
Naive CD4 T-cell nTPM: 154.0
Samples: 6
Max nTPM: 185.2
Min nTPM: 120.0
P10809_1015
120.0
P10809_1030
146.9
P10809_1049
185.2
P10809_1068
155.1
P10809_1085
157.1
P10809_1112
159.7
Naive CD8 T-cell nTPM: 170.6
Samples: 6
Max nTPM: 212.9
Min nTPM: 144.8
P10809_1016
157.0
P10809_1031
181.3
P10809_1050
180.6
P10809_1069
144.8
P10809_1087
146.7
P10809_1110
212.9
T-reg nTPM: 211.9
Samples: 6
Max nTPM: 263.4
Min nTPM: 165.3
P10809_1018
165.3
P10809_1037
263.4
P10809_1056
203.8
P10809_1075
167.9
P10809_1094
250.5
P10809_1106
220.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.5
Samples: 4
Max nTPM: 116.4
Min nTPM: 71.2
RHH5202_R3573
71.2
RHH5230_R3602
81.4
RHH5259_R3631
116.4
RHH5288_R3660
113.0
Effector memory CD8 T-cell nTPM: 47.4
Samples: 4
Max nTPM: 68.7
Min nTPM: 29.7
RHH5203_R3574
55.1
RHH5231_R3603
35.9
RHH5260_R3632
68.7
RHH5289_R3661
29.7
MAIT T-cell nTPM: 101.0
Samples: 4
Max nTPM: 132.3
Min nTPM: 76.4
RHH5233_R3605
76.4
RHH5205_R3576
107.5
RHH5262_R3634
87.8
RHH5297_R3663
132.3
Memory CD4 T-cell TFH nTPM: 76.8
Samples: 4
Max nTPM: 112.1
Min nTPM: 58.6
RHH5300_R3666
112.1
RHH5236_R3608
58.6
RHH5265_R3637
69.8
RHH5208_R3579
66.8
Memory CD4 T-cell Th1 nTPM: 112.2
Samples: 4
Max nTPM: 160.8
Min nTPM: 75.0
RHH5210_R3581
75.0
RHH5302_R3668
160.8
RHH5238_R3610
110.8
RHH5267_R3639
102.2
Memory CD4 T-cell Th1/Th17 nTPM: 91.6
Samples: 4
Max nTPM: 107.2
Min nTPM: 76.9
RHH5303_R3669
107.2
RHH5211_R3582
80.9
RHH5239_R3611
76.9
RHH5268_R3640
101.5
Memory CD4 T-cell Th17 nTPM: 97.3
Samples: 4
Max nTPM: 133.4
Min nTPM: 80.4
RHH5304_R3670
133.4
RHH5212_R3583
80.4
RHH5240_R3612
84.9
RHH5269_R3641
90.6
Memory CD4 T-cell Th2 nTPM: 102.9
Samples: 4
Max nTPM: 139.2
Min nTPM: 84.7
RHH5305_R3671
139.2
RHH5213_R3584
96.8
RHH5241_R3613
91.0
RHH5270_R3642
84.7
Naive CD4 T-cell nTPM: 82.5
Samples: 4
Max nTPM: 118.9
Min nTPM: 43.2
RHH5306_R3672
100.4
RHH5214_R3585
118.9
RHH5242_R3614
43.2
RHH5271_R3643
67.3
Naive CD8 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 108.2
Min nTPM: 68.0
RHH5201_R3572
68.0
RHH5229_R3601
87.7
RHH5258_R3630
87.7
RHH5287_R3659
108.2
Non-Vd2 gdTCR nTPM: 75.6
Samples: 4
Max nTPM: 115.1
Min nTPM: 51.1
RHH5235_R3607
73.4
RHH5264_R3636
51.1
RHH5207_R3578
62.6
RHH5299_R3665
115.1
T-reg nTPM: 98.0
Samples: 4
Max nTPM: 145.1
Min nTPM: 59.9
RHH5301_R3667
145.1
RHH5237_R3609
59.9
RHH5266_R3638
90.0
RHH5209_R3580
97.1
Terminal effector memory CD4 T-cell nTPM: 43.3
Samples: 2
Max nTPM: 51.5
Min nTPM: 35.1
RHH5243_R3615
51.5
RHH5272_R3644
35.1
Terminal effector memory CD8 T-cell nTPM: 108.9
Samples: 4
Max nTPM: 173.4
Min nTPM: 50.1
RHH5232_R3604
50.1
RHH5204_R3575
173.4
RHH5261_R3633
119.2
RHH5296_R3662
92.9
Vd2 gdTCR nTPM: 135.0
Samples: 4
Max nTPM: 221.1
Min nTPM: 73.4
RHH5234_R3606
78.7
RHH5206_R3577
221.1
RHH5263_R3635
73.4
RHH5298_R3664
166.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
