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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
197.3
nTPM
Monaco:
101.4
nTPM
Schmiedel:
0.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
197.3
HPA sample
nTPM
gdT-cell nTPM: 159.8
Samples: 6
Max nTPM: 202.4
Min nTPM: 128.4
P10809_1007
128.4
P10809_1022
173.2
P10809_1041
202.4
P10809_1060
136.1
P10809_1077
156.8
P10809_1098
161.6
MAIT T-cell nTPM: 171.7
Samples: 6
Max nTPM: 216.2
Min nTPM: 126.2
P10809_1006
126.2
P10809_1024
178.2
P10809_1043
179.6
P10809_1062
165.0
P10809_1083
165.0
P10809_1097
216.2
Memory CD4 T-cell nTPM: 174.3
Samples: 6
Max nTPM: 199.8
Min nTPM: 136.9
P10809_1014
136.9
P10809_1026
171.7
P10809_1045
173.5
P10809_1064
181.1
P10809_1086
199.8
P10809_1113
182.6
Memory CD8 T-cell nTPM: 176.4
Samples: 5
Max nTPM: 195.5
Min nTPM: 142.4
P10809_1012
142.4
P10809_1027
169.4
P10809_1046
195.5
P10809_1065
183.2
P10809_1111
191.4
Naive CD4 T-cell nTPM: 151.2
Samples: 6
Max nTPM: 184.8
Min nTPM: 109.8
P10809_1015
109.8
P10809_1030
147.9
P10809_1049
179.2
P10809_1068
145.1
P10809_1085
184.8
P10809_1112
140.1
Naive CD8 T-cell nTPM: 152.7
Samples: 6
Max nTPM: 195.5
Min nTPM: 116.1
P10809_1016
116.1
P10809_1031
155.9
P10809_1050
141.5
P10809_1069
177.3
P10809_1087
195.5
P10809_1110
129.8
T-reg nTPM: 197.2
Samples: 6
Max nTPM: 260.7
Min nTPM: 162.0
P10809_1018
162.0
P10809_1037
220.6
P10809_1056
177.2
P10809_1075
198.2
P10809_1094
164.7
P10809_1106
260.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 49.7
Samples: 4
Max nTPM: 79.3
Min nTPM: 36.9
RHH5202_R3573
42.6
RHH5230_R3602
40.0
RHH5259_R3631
36.9
RHH5288_R3660
79.3
Effector memory CD8 T-cell nTPM: 46.5
Samples: 4
Max nTPM: 59.6
Min nTPM: 36.4
RHH5203_R3574
39.4
RHH5231_R3603
59.6
RHH5260_R3632
50.6
RHH5289_R3661
36.4
MAIT T-cell nTPM: 71.8
Samples: 4
Max nTPM: 110.6
Min nTPM: 36.5
RHH5233_R3605
59.6
RHH5205_R3576
36.5
RHH5262_R3634
80.3
RHH5297_R3663
110.6
Memory CD4 T-cell TFH nTPM: 73.7
Samples: 4
Max nTPM: 115.1
Min nTPM: 47.7
RHH5300_R3666
76.2
RHH5236_R3608
115.1
RHH5265_R3637
47.7
RHH5208_R3579
55.7
Memory CD4 T-cell Th1 nTPM: 71.2
Samples: 4
Max nTPM: 141.2
Min nTPM: 36.7
RHH5210_R3581
36.7
RHH5302_R3668
141.2
RHH5238_R3610
47.2
RHH5267_R3639
59.8
Memory CD4 T-cell Th1/Th17 nTPM: 81.6
Samples: 4
Max nTPM: 154.4
Min nTPM: 27.4
RHH5303_R3669
154.4
RHH5211_R3582
81.9
RHH5239_R3611
27.4
RHH5268_R3640
62.6
Memory CD4 T-cell Th17 nTPM: 54.0
Samples: 4
Max nTPM: 82.0
Min nTPM: 36.8
RHH5304_R3670
52.6
RHH5212_R3583
82.0
RHH5240_R3612
44.5
RHH5269_R3641
36.8
Memory CD4 T-cell Th2 nTPM: 58.8
Samples: 4
Max nTPM: 92.2
Min nTPM: 34.0
RHH5305_R3671
59.5
RHH5213_R3584
49.6
RHH5241_R3613
92.2
RHH5270_R3642
34.0
Naive CD4 T-cell nTPM: 47.4
Samples: 4
Max nTPM: 59.1
Min nTPM: 35.5
RHH5306_R3672
53.6
RHH5214_R3585
59.1
RHH5242_R3614
35.5
RHH5271_R3643
41.2
Naive CD8 T-cell nTPM: 38.7
Samples: 4
Max nTPM: 58.5
Min nTPM: 24.0
RHH5201_R3572
24.0
RHH5229_R3601
29.5
RHH5258_R3630
58.5
RHH5287_R3659
42.8
Non-Vd2 gdTCR nTPM: 75.5
Samples: 4
Max nTPM: 129.5
Min nTPM: 37.1
RHH5235_R3607
37.1
RHH5264_R3636
92.3
RHH5207_R3578
42.9
RHH5299_R3665
129.5
T-reg nTPM: 52.1
Samples: 4
Max nTPM: 79.5
Min nTPM: 25.6
RHH5301_R3667
79.5
RHH5237_R3609
73.9
RHH5266_R3638
29.4
RHH5209_R3580
25.6
Terminal effector memory CD4 T-cell nTPM: 67.2
Samples: 2
Max nTPM: 97.4
Min nTPM: 36.9
RHH5243_R3615
36.9
RHH5272_R3644
97.4
Terminal effector memory CD8 T-cell nTPM: 92.7
Samples: 4
Max nTPM: 130.5
Min nTPM: 56.0
RHH5232_R3604
56.0
RHH5204_R3575
130.5
RHH5261_R3633
73.2
RHH5296_R3662
111.2
Vd2 gdTCR nTPM: 101.5
Samples: 4
Max nTPM: 160.5
Min nTPM: 37.5
RHH5234_R3606
37.5
RHH5206_R3577
160.5
RHH5263_R3635
55.7
RHH5298_R3664
152.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
