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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.6
nTPM
Monaco:
138.4
nTPM
Schmiedel:
69.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.6
HPA sample
nTPM
gdT-cell nTPM: 90.6
Samples: 6
Max nTPM: 108.0
Min nTPM: 72.2
P10809_1007
86.1
P10809_1022
108.0
P10809_1041
107.4
P10809_1060
77.3
P10809_1077
92.3
P10809_1098
72.2
MAIT T-cell nTPM: 66.7
Samples: 6
Max nTPM: 104.0
Min nTPM: 46.6
P10809_1006
58.5
P10809_1024
80.7
P10809_1043
50.0
P10809_1062
60.6
P10809_1083
46.6
P10809_1097
104.0
Memory CD4 T-cell nTPM: 67.2
Samples: 6
Max nTPM: 77.7
Min nTPM: 58.6
P10809_1014
77.7
P10809_1026
58.6
P10809_1045
71.1
P10809_1064
63.0
P10809_1086
66.6
P10809_1113
66.2
Memory CD8 T-cell nTPM: 81.4
Samples: 5
Max nTPM: 90.3
Min nTPM: 75.9
P10809_1012
75.9
P10809_1027
90.3
P10809_1046
76.6
P10809_1065
81.1
P10809_1111
83.1
Naive CD4 T-cell nTPM: 84.0
Samples: 6
Max nTPM: 93.7
Min nTPM: 71.3
P10809_1015
93.7
P10809_1030
87.7
P10809_1049
91.5
P10809_1068
84.9
P10809_1085
75.1
P10809_1112
71.3
Naive CD8 T-cell nTPM: 87.6
Samples: 6
Max nTPM: 101.6
Min nTPM: 69.7
P10809_1016
101.6
P10809_1031
95.3
P10809_1050
90.6
P10809_1069
85.6
P10809_1087
69.7
P10809_1110
82.7
T-reg nTPM: 74.2
Samples: 6
Max nTPM: 91.9
Min nTPM: 44.8
P10809_1018
70.2
P10809_1037
44.8
P10809_1056
74.2
P10809_1075
91.9
P10809_1094
82.8
P10809_1106
81.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.9
Samples: 4
Max nTPM: 123.9
Min nTPM: 49.2
RHH5202_R3573
91.6
RHH5230_R3602
49.2
RHH5259_R3631
58.9
RHH5288_R3660
123.9
Effector memory CD8 T-cell nTPM: 72.2
Samples: 4
Max nTPM: 112.3
Min nTPM: 43.6
RHH5203_R3574
75.2
RHH5231_R3603
112.3
RHH5260_R3632
57.7
RHH5289_R3661
43.6
MAIT T-cell nTPM: 66.4
Samples: 4
Max nTPM: 96.1
Min nTPM: 32.5
RHH5233_R3605
82.7
RHH5205_R3576
32.5
RHH5262_R3634
54.3
RHH5297_R3663
96.1
Memory CD4 T-cell TFH nTPM: 88.8
Samples: 4
Max nTPM: 120.8
Min nTPM: 61.5
RHH5300_R3666
120.8
RHH5236_R3608
102.8
RHH5265_R3637
70.0
RHH5208_R3579
61.5
Memory CD4 T-cell Th1 nTPM: 89.2
Samples: 4
Max nTPM: 160.7
Min nTPM: 55.5
RHH5210_R3581
70.9
RHH5302_R3668
160.7
RHH5238_R3610
69.8
RHH5267_R3639
55.5
Memory CD4 T-cell Th1/Th17 nTPM: 76.5
Samples: 4
Max nTPM: 118.0
Min nTPM: 27.7
RHH5303_R3669
118.0
RHH5211_R3582
97.4
RHH5239_R3611
27.7
RHH5268_R3640
63.0
Memory CD4 T-cell Th17 nTPM: 51.3
Samples: 4
Max nTPM: 77.5
Min nTPM: 31.5
RHH5304_R3670
50.7
RHH5212_R3583
77.5
RHH5240_R3612
31.5
RHH5269_R3641
45.4
Memory CD4 T-cell Th2 nTPM: 63.5
Samples: 4
Max nTPM: 88.3
Min nTPM: 51.3
RHH5305_R3671
88.3
RHH5213_R3584
51.3
RHH5241_R3613
58.6
RHH5270_R3642
55.7
Naive CD4 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 128.4
Min nTPM: 53.7
RHH5306_R3672
102.0
RHH5214_R3585
128.4
RHH5242_R3614
53.7
RHH5271_R3643
64.9
Naive CD8 T-cell nTPM: 82.1
Samples: 4
Max nTPM: 119.3
Min nTPM: 50.4
RHH5201_R3572
78.2
RHH5229_R3601
50.4
RHH5258_R3630
119.3
RHH5287_R3659
80.4
Non-Vd2 gdTCR nTPM: 102.9
Samples: 4
Max nTPM: 128.0
Min nTPM: 74.7
RHH5235_R3607
74.7
RHH5264_R3636
98.0
RHH5207_R3578
111.0
RHH5299_R3665
128.0
T-reg nTPM: 98.1
Samples: 4
Max nTPM: 142.3
Min nTPM: 59.7
RHH5301_R3667
142.3
RHH5237_R3609
116.1
RHH5266_R3638
59.7
RHH5209_R3580
74.4
Terminal effector memory CD4 T-cell nTPM: 86.4
Samples: 2
Max nTPM: 117.6
Min nTPM: 55.1
RHH5243_R3615
55.1
RHH5272_R3644
117.6
Terminal effector memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 203.1
Min nTPM: 89.2
RHH5232_R3604
101.8
RHH5204_R3575
203.1
RHH5261_R3633
89.2
RHH5296_R3662
103.9
Vd2 gdTCR nTPM: 138.4
Samples: 4
Max nTPM: 220.3
Min nTPM: 55.1
RHH5234_R3606
111.4
RHH5206_R3577
220.3
RHH5263_R3635
55.1
RHH5298_R3664
166.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
