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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
270.9
nTPM
Monaco:
429.1
nTPM
Schmiedel:
205.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
270.9
HPA sample
nTPM
gdT-cell nTPM: 256.2
Samples: 6
Max nTPM: 360.8
Min nTPM: 183.8
P10809_1007
183.8
P10809_1022
284.9
P10809_1041
360.8
P10809_1060
197.7
P10809_1077
248.7
P10809_1098
261.4
MAIT T-cell nTPM: 270.9
Samples: 6
Max nTPM: 343.8
Min nTPM: 194.6
P10809_1006
194.6
P10809_1024
271.5
P10809_1043
343.8
P10809_1062
277.1
P10809_1083
260.1
P10809_1097
278.0
Memory CD4 T-cell nTPM: 218.7
Samples: 6
Max nTPM: 273.1
Min nTPM: 158.2
P10809_1014
158.2
P10809_1026
213.3
P10809_1045
273.1
P10809_1064
184.2
P10809_1086
245.6
P10809_1113
238.0
Memory CD8 T-cell nTPM: 239.9
Samples: 5
Max nTPM: 309.5
Min nTPM: 190.7
P10809_1012
190.7
P10809_1027
235.3
P10809_1046
309.5
P10809_1065
231.1
P10809_1111
232.9
Naive CD4 T-cell nTPM: 203.7
Samples: 6
Max nTPM: 283.3
Min nTPM: 139.9
P10809_1015
139.9
P10809_1030
177.0
P10809_1049
283.3
P10809_1068
206.9
P10809_1085
211.3
P10809_1112
203.8
Naive CD8 T-cell nTPM: 210.2
Samples: 6
Max nTPM: 248.2
Min nTPM: 156.4
P10809_1016
156.4
P10809_1031
181.5
P10809_1050
247.5
P10809_1069
220.8
P10809_1087
248.2
P10809_1110
206.8
T-reg nTPM: 256.7
Samples: 6
Max nTPM: 359.7
Min nTPM: 190.1
P10809_1018
190.1
P10809_1037
222.4
P10809_1056
359.7
P10809_1075
222.6
P10809_1094
300.8
P10809_1106
244.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
429.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 297.3
Samples: 4
Max nTPM: 337.9
Min nTPM: 220.9
RHH5202_R3573
337.9
RHH5230_R3602
321.9
RHH5259_R3631
220.9
RHH5288_R3660
308.3
Effector memory CD8 T-cell nTPM: 428.3
Samples: 4
Max nTPM: 523.1
Min nTPM: 330.1
RHH5203_R3574
488.0
RHH5231_R3603
330.1
RHH5260_R3632
371.9
RHH5289_R3661
523.1
MAIT T-cell nTPM: 388.3
Samples: 4
Max nTPM: 414.9
Min nTPM: 357.4
RHH5233_R3605
377.9
RHH5205_R3576
402.9
RHH5262_R3634
414.9
RHH5297_R3663
357.4
Memory CD4 T-cell TFH nTPM: 315.9
Samples: 4
Max nTPM: 364.4
Min nTPM: 264.0
RHH5300_R3666
264.0
RHH5236_R3608
341.0
RHH5265_R3637
294.0
RHH5208_R3579
364.4
Memory CD4 T-cell Th1 nTPM: 285.3
Samples: 4
Max nTPM: 324.3
Min nTPM: 202.1
RHH5210_R3581
308.1
RHH5302_R3668
324.3
RHH5238_R3610
202.1
RHH5267_R3639
306.7
Memory CD4 T-cell Th1/Th17 nTPM: 318.8
Samples: 4
Max nTPM: 408.2
Min nTPM: 254.3
RHH5303_R3669
408.2
RHH5211_R3582
337.5
RHH5239_R3611
254.3
RHH5268_R3640
275.2
Memory CD4 T-cell Th17 nTPM: 299.8
Samples: 4
Max nTPM: 329.3
Min nTPM: 271.1
RHH5304_R3670
329.3
RHH5212_R3583
278.7
RHH5240_R3612
320.1
RHH5269_R3641
271.1
Memory CD4 T-cell Th2 nTPM: 320.2
Samples: 4
Max nTPM: 369.5
Min nTPM: 296.2
RHH5305_R3671
296.2
RHH5213_R3584
369.5
RHH5241_R3613
309.5
RHH5270_R3642
305.4
Naive CD4 T-cell nTPM: 266.8
Samples: 4
Max nTPM: 283.7
Min nTPM: 246.5
RHH5306_R3672
263.5
RHH5214_R3585
273.4
RHH5242_R3614
283.7
RHH5271_R3643
246.5
Naive CD8 T-cell nTPM: 253.0
Samples: 4
Max nTPM: 328.8
Min nTPM: 160.5
RHH5201_R3572
328.8
RHH5229_R3601
160.5
RHH5258_R3630
287.9
RHH5287_R3659
234.6
Non-Vd2 gdTCR nTPM: 404.8
Samples: 4
Max nTPM: 494.3
Min nTPM: 315.6
RHH5235_R3607
315.6
RHH5264_R3636
420.9
RHH5207_R3578
494.3
RHH5299_R3665
388.3
T-reg nTPM: 288.2
Samples: 4
Max nTPM: 338.8
Min nTPM: 263.4
RHH5301_R3667
286.2
RHH5237_R3609
338.8
RHH5266_R3638
264.3
RHH5209_R3580
263.4
Terminal effector memory CD4 T-cell nTPM: 379.5
Samples: 2
Max nTPM: 380.8
Min nTPM: 378.1
RHH5243_R3615
380.8
RHH5272_R3644
378.1
Terminal effector memory CD8 T-cell nTPM: 429.1
Samples: 4
Max nTPM: 479.7
Min nTPM: 395.4
RHH5232_R3604
479.7
RHH5204_R3575
395.4
RHH5261_R3633
399.6
RHH5296_R3662
441.8
Vd2 gdTCR nTPM: 404.0
Samples: 4
Max nTPM: 446.9
Min nTPM: 359.6
RHH5234_R3606
446.9
RHH5206_R3577
429.1
RHH5263_R3635
380.3
RHH5298_R3664
359.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.