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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
309.0
nTPM
Monaco:
235.6
nTPM
Schmiedel:
117.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
309.0
HPA sample
nTPM
gdT-cell nTPM: 309.0
Samples: 6
Max nTPM: 405.3
Min nTPM: 221.7
P10809_1007
221.7
P10809_1022
243.8
P10809_1041
380.9
P10809_1060
224.5
P10809_1077
377.5
P10809_1098
405.3
MAIT T-cell nTPM: 212.6
Samples: 6
Max nTPM: 265.9
Min nTPM: 154.3
P10809_1006
154.3
P10809_1024
199.0
P10809_1043
265.9
P10809_1062
184.7
P10809_1083
206.7
P10809_1097
265.0
Memory CD4 T-cell nTPM: 164.8
Samples: 6
Max nTPM: 252.8
Min nTPM: 98.6
P10809_1014
98.6
P10809_1026
142.6
P10809_1045
140.7
P10809_1064
204.1
P10809_1086
252.8
P10809_1113
149.9
Memory CD8 T-cell nTPM: 276.2
Samples: 5
Max nTPM: 328.2
Min nTPM: 171.3
P10809_1012
171.3
P10809_1027
319.2
P10809_1046
253.2
P10809_1065
328.2
P10809_1111
309.0
Naive CD4 T-cell nTPM: 54.1
Samples: 6
Max nTPM: 125.7
Min nTPM: 34.2
P10809_1015
35.3
P10809_1030
49.7
P10809_1049
40.1
P10809_1068
34.2
P10809_1085
125.7
P10809_1112
39.3
Naive CD8 T-cell nTPM: 197.0
Samples: 6
Max nTPM: 398.3
Min nTPM: 58.2
P10809_1016
58.2
P10809_1031
208.9
P10809_1050
213.0
P10809_1069
193.0
P10809_1087
398.3
P10809_1110
110.4
T-reg nTPM: 169.0
Samples: 6
Max nTPM: 217.1
Min nTPM: 118.0
P10809_1018
137.7
P10809_1037
143.3
P10809_1056
217.1
P10809_1075
118.0
P10809_1094
197.6
P10809_1106
200.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.9
Samples: 4
Max nTPM: 97.5
Min nTPM: 57.9
RHH5202_R3573
93.8
RHH5230_R3602
57.9
RHH5259_R3631
78.3
RHH5288_R3660
97.5
Effector memory CD8 T-cell nTPM: 212.7
Samples: 4
Max nTPM: 226.5
Min nTPM: 204.8
RHH5203_R3574
204.8
RHH5231_R3603
226.5
RHH5260_R3632
209.2
RHH5289_R3661
210.2
MAIT T-cell nTPM: 132.3
Samples: 4
Max nTPM: 171.2
Min nTPM: 114.2
RHH5233_R3605
116.8
RHH5205_R3576
114.2
RHH5262_R3634
126.9
RHH5297_R3663
171.2
Memory CD4 T-cell TFH nTPM: 60.1
Samples: 4
Max nTPM: 77.7
Min nTPM: 46.1
RHH5300_R3666
56.0
RHH5236_R3608
77.7
RHH5265_R3637
46.1
RHH5208_R3579
60.4
Memory CD4 T-cell Th1 nTPM: 82.5
Samples: 4
Max nTPM: 113.1
Min nTPM: 54.8
RHH5210_R3581
54.8
RHH5302_R3668
113.1
RHH5238_R3610
79.0
RHH5267_R3639
83.1
Memory CD4 T-cell Th1/Th17 nTPM: 96.1
Samples: 4
Max nTPM: 150.9
Min nTPM: 56.6
RHH5303_R3669
150.9
RHH5211_R3582
85.6
RHH5239_R3611
56.6
RHH5268_R3640
91.1
Memory CD4 T-cell Th17 nTPM: 72.8
Samples: 4
Max nTPM: 91.7
Min nTPM: 52.8
RHH5304_R3670
89.8
RHH5212_R3583
91.7
RHH5240_R3612
52.8
RHH5269_R3641
57.0
Memory CD4 T-cell Th2 nTPM: 60.5
Samples: 4
Max nTPM: 72.0
Min nTPM: 50.1
RHH5305_R3671
72.0
RHH5213_R3584
53.8
RHH5241_R3613
50.1
RHH5270_R3642
66.0
Naive CD4 T-cell nTPM: 31.2
Samples: 4
Max nTPM: 36.2
Min nTPM: 26.6
RHH5306_R3672
27.6
RHH5214_R3585
34.5
RHH5242_R3614
36.2
RHH5271_R3643
26.6
Naive CD8 T-cell nTPM: 38.4
Samples: 4
Max nTPM: 45.6
Min nTPM: 34.1
RHH5201_R3572
38.0
RHH5229_R3601
45.6
RHH5258_R3630
35.8
RHH5287_R3659
34.1
Non-Vd2 gdTCR nTPM: 219.8
Samples: 4
Max nTPM: 271.6
Min nTPM: 151.6
RHH5235_R3607
151.6
RHH5264_R3636
271.6
RHH5207_R3578
235.6
RHH5299_R3665
220.4
T-reg nTPM: 69.7
Samples: 4
Max nTPM: 86.8
Min nTPM: 59.2
RHH5301_R3667
73.3
RHH5237_R3609
86.8
RHH5266_R3638
59.2
RHH5209_R3580
59.3
Terminal effector memory CD4 T-cell nTPM: 136.2
Samples: 2
Max nTPM: 146.2
Min nTPM: 126.1
RHH5243_R3615
126.1
RHH5272_R3644
146.2
Terminal effector memory CD8 T-cell nTPM: 235.6
Samples: 4
Max nTPM: 279.0
Min nTPM: 165.3
RHH5232_R3604
165.3
RHH5204_R3575
246.6
RHH5261_R3633
279.0
RHH5296_R3662
251.4
Vd2 gdTCR nTPM: 182.4
Samples: 4
Max nTPM: 294.0
Min nTPM: 118.3
RHH5234_R3606
118.3
RHH5206_R3577
294.0
RHH5263_R3635
164.2
RHH5298_R3664
152.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
