HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:93.0 nTPM
HPA Brain:55.8 nTPM
GTEx:93.0 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:72.2 nTPM
Mouse:99.3 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.8
Sample id Sample description nTPM
Hippocampus
nTPM: 52.6
1898 Male, age 80, left hemisphere 65.5
1855 Male, age 76, left hemisphere 57.3
1911 Female, age 85, right hemisphere 53.8
2529 Female, age 94, left hemisphere 50.5
2148 Female, age 91, left hemisphere 44.6
2621 Female, age 67, right hemisphere 43.9
Dentate gyrus
nTPM: 49.9
2010 Male, age 76, both hemispheres 60.2
1927 Female, age 91, both hemispheres 57.4
2530 Female, age 94, left hemisphere 53.5
2246 Female, age 85, both hemispheres 51.3
2528 Male, age 74, both hemispheres 46.1
2531 Female, age 67, both hemispheres 31.3
Entorhinal gyrus
nTPM: 46.1
1938 Female, age 85, left hemisphere 52.3
2764 Male, age 80, right hemisphere 51.6
2117 Female, age 91, right hemisphere 50.5
1787 Male, age 76, left hemisphere 48.3
2613 Female, age 94, left hemisphere 38.5
2686 Male, age 75, right hemisphere 35.5
Hippocampus, CA1
nTPM: 55.8
2749 Male, age 80, left hemisphere 68.7
1873 Female, age 85, both hemispheres 57.6
2045 Male, age 76, both hemispheres 56.4
2527 Male, age 74, both hemispheres 48.4
2082 Female, age 91, right hemisphere 48.0
Hippocampus, CA2
nTPM: 55.4
1892 Male, age 76, both hemispheres 70.9
2249 Male, age 74, both hemispheres 59.5
1963 Male, age 80, left hemisphere 59.1
1940 Female, age 85, left hemisphere 52.1
2437 Female, age 94, left hemisphere 45.5
2113 Female, age 91, right hemisphere 45.1
Hippocampus, CA3
nTPM: 50.4
1867 Male, age 76, both hemispheres 63.5
2436 Male, age 74, both hemispheres 58.8
1891 Female, age 85, both hemispheres 54.6
2137 Male, age 80, left hemisphere 51.0
2620 Female, age 94, left hemisphere 44.9
2861 Female, age 67, both hemispheres 29.3
Parahippocampal cortex
nTPM: 47.6
1850 Male, age 80, both hemispheres 56.2
1990 Female, age 91, right hemisphere 56.0
1933 Female, age 85, both hemispheres 55.6
2250 Female, age 67, right hemisphere 50.7
2692 Male, age 74, both hemispheres 46.9
2018 Male, age 76, both hemispheres 46.7
2693 Female, age 94, both hemispheres 44.7
2532 Female, age 72, left hemisphere 43.7
2245 Female, age 91, both hemispheres 42.1
2622 Female, age 67, right hemisphere 33.1
Perirhinal gyrus
nTPM: 51.7
1847 Female, age 91, left hemisphere 58.4
1841 Female, age 85, right hemisphere 54.8
1794 Male, age 80, right hemisphere 53.4
2521 Female, age 94, right hemisphere 47.3
2848 Male, age 76, right hemisphere 44.8
Subiculum
nTPM: 50.6
1901 Male, age 80, both hemispheres 57.3
1977 Female, age 85, both hemispheres 52.2
2619 Male, age 74, both hemispheres 50.7
2438 Female, age 94, left hemisphere 50.3
2042 Male, age 76, both hemispheres 49.3
2729 Female, age 91, right hemisphere 43.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.0
Samples: 197

Max nTPM: 150.9
Min nTPM: 51.0
Std nTPM: 18.8
Median nTPM: 90.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 150.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 146.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 135.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 134.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 134.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 133.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 132.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 129.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 129.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 129.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10153-102I9 76 years, female 75.7
FF:10169-103B7 60 years, female 72.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.2
Pig sample Sample description nTPM
Subiculum
nTPM: 50.3
Samples: 4

Max nTPM: 66.7
Min nTPM: 42.2
Sample A Female 66.7
Sample B Female 44.4
Sample C Male 42.2
Sample D Male 47.8
Dorsal hippocampus
nTPM: 72.3
Samples: 4

Max nTPM: 107.4
Min nTPM: 47.1
Sample A Female 107.4
Sample B Female 67.1
Sample C Male 67.5
Sample D Male 47.1
Entorhinal cortex
nTPM: 56.5
Samples: 4

Max nTPM: 61.7
Min nTPM: 50.0
Sample A Female 58.9
Sample B Female 61.7
Sample C Male 55.5
Sample D Male 50.0
Ventral hippocampus
nTPM: 56.5
Samples: 4

Max nTPM: 64.5
Min nTPM: 44.3
Sample A Female 64.5
Sample B Female 44.3
Sample C Male 59.8
Sample D Male 57.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.7
Samples: 4

Max nTPM: 100.0
Min nTPM: 75.0
Sample A Male 88.9
Sample B Male 95.0
Sample C Female 100.0
Sample D Female 75.0
Hippocampal formation
nTPM: 99.3
Samples: 4

Max nTPM: 112.3
Min nTPM: 91.2
Sample A Male 112.3
Sample B Male 91.2
Sample C Female 91.4
Sample D Female 102.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
68191144 Antisense, RP_041122_02_H02, Mouse strain C57BL/6J (56 days, male) 1.9

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