HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:29.6 nTPM
HPA Brain:247.4 nTPM
GTEx:29.6 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Mouse:64.4 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003446
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 247.4
Sample id Sample description nTPM
Hippocampus
nTPM: 243.0
2529 Female, age 94, left hemisphere 277.3
1911 Female, age 85, right hemisphere 267.0
2621 Female, age 67, right hemisphere 262.8
1855 Male, age 76, left hemisphere 256.3
2148 Female, age 91, left hemisphere 233.9
1898 Male, age 80, left hemisphere 160.7
Dentate gyrus
nTPM: 247.3
2531 Female, age 67, both hemispheres 360.3
1927 Female, age 91, both hemispheres 298.3
2530 Female, age 94, left hemisphere 248.1
2246 Female, age 85, both hemispheres 212.8
2010 Male, age 76, both hemispheres 182.3
2528 Male, age 74, both hemispheres 182.0
Entorhinal gyrus
nTPM: 169.3
2686 Male, age 75, right hemisphere 215.7
1787 Male, age 76, left hemisphere 193.1
2613 Female, age 94, left hemisphere 192.3
2117 Female, age 91, right hemisphere 152.1
1938 Female, age 85, left hemisphere 149.3
2764 Male, age 80, right hemisphere 113.3
Hippocampus, CA1
nTPM: 231.6
2749 Male, age 80, left hemisphere 290.5
2527 Male, age 74, both hemispheres 283.0
2082 Female, age 91, right hemisphere 205.2
1873 Female, age 85, both hemispheres 189.7
2045 Male, age 76, both hemispheres 189.3
Hippocampus, CA2
nTPM: 217.8
1963 Male, age 80, left hemisphere 367.5
2437 Female, age 94, left hemisphere 251.2
2113 Female, age 91, right hemisphere 242.7
1892 Male, age 76, both hemispheres 212.4
1940 Female, age 85, left hemisphere 120.6
2249 Male, age 74, both hemispheres 112.4
Hippocampus, CA3
nTPM: 247.4
2861 Female, age 67, both hemispheres 419.5
2137 Male, age 80, left hemisphere 352.0
1867 Male, age 76, both hemispheres 186.3
2620 Female, age 94, left hemisphere 185.6
2436 Male, age 74, both hemispheres 175.0
1891 Female, age 85, both hemispheres 165.7
Parahippocampal cortex
nTPM: 198.1
2245 Female, age 91, both hemispheres 332.1
2250 Female, age 67, right hemisphere 244.3
2018 Male, age 76, both hemispheres 221.2
2622 Female, age 67, right hemisphere 217.3
2693 Female, age 94, both hemispheres 194.6
2532 Female, age 72, left hemisphere 176.3
1933 Female, age 85, both hemispheres 169.0
2692 Male, age 74, both hemispheres 149.5
1990 Female, age 91, right hemisphere 143.7
1850 Male, age 80, both hemispheres 133.3
Perirhinal gyrus
nTPM: 181.6
2521 Female, age 94, right hemisphere 211.1
1847 Female, age 91, left hemisphere 194.0
1794 Male, age 80, right hemisphere 181.6
1841 Female, age 85, right hemisphere 179.4
2848 Male, age 76, right hemisphere 142.0
Subiculum
nTPM: 138.8
2042 Male, age 76, both hemispheres 210.1
1901 Male, age 80, both hemispheres 140.8
2438 Female, age 94, left hemisphere 126.7
1977 Female, age 85, both hemispheres 125.6
2619 Male, age 74, both hemispheres 124.7
2729 Female, age 91, right hemisphere 104.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 145.0
Min nTPM: 1.5
Std nTPM: 23.9
Median nTPM: 22.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 145.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 107.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 107.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 103.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 100.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 85.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 84.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 84.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 84.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 75.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 75.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.0
FF:10153-102I9 76 years, female 82.3
FF:10169-103B7 60 years, female 75.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 56.5
Sample A Male 56.5
Sample B Male 57.7
Sample C Female 57.0
Sample D Female 56.6
Hippocampal formation
nTPM: 64.4
Samples: 4

Max nTPM: 68.3
Min nTPM: 58.6
Sample A Male 58.6
Sample B Male 68.3
Sample C Female 66.2
Sample D Female 64.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
69816840 Antisense, RP_050510_02_A04, Mouse strain C57BL/6J (56 days, male) 3.3

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