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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
185.7
nTPM
Monaco:
117.0
nTPM
Schmiedel:
15.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.7
HPA sample
nTPM
gdT-cell nTPM: 123.7
Samples: 6
Max nTPM: 162.2
Min nTPM: 85.6
P10809_1007
85.6
P10809_1022
134.3
P10809_1041
162.2
P10809_1060
132.3
P10809_1077
119.7
P10809_1098
108.2
MAIT T-cell nTPM: 133.1
Samples: 6
Max nTPM: 199.9
Min nTPM: 86.1
P10809_1006
86.1
P10809_1024
199.9
P10809_1043
130.5
P10809_1062
120.3
P10809_1083
113.8
P10809_1097
148.1
Memory CD4 T-cell nTPM: 132.2
Samples: 6
Max nTPM: 157.0
Min nTPM: 95.9
P10809_1014
95.9
P10809_1026
156.3
P10809_1045
157.0
P10809_1064
127.1
P10809_1086
132.8
P10809_1113
124.1
Memory CD8 T-cell nTPM: 138.6
Samples: 5
Max nTPM: 164.4
Min nTPM: 103.0
P10809_1012
103.0
P10809_1027
164.4
P10809_1046
147.9
P10809_1065
141.7
P10809_1111
135.8
Naive CD4 T-cell nTPM: 101.9
Samples: 6
Max nTPM: 135.7
Min nTPM: 61.3
P10809_1015
61.3
P10809_1030
107.0
P10809_1049
118.0
P10809_1068
92.6
P10809_1085
135.7
P10809_1112
96.9
Naive CD8 T-cell nTPM: 110.3
Samples: 6
Max nTPM: 146.4
Min nTPM: 70.7
P10809_1016
70.7
P10809_1031
146.4
P10809_1050
119.8
P10809_1069
111.5
P10809_1087
127.4
P10809_1110
85.8
T-reg nTPM: 185.7
Samples: 6
Max nTPM: 262.6
Min nTPM: 111.1
P10809_1018
111.1
P10809_1037
205.5
P10809_1056
262.6
P10809_1075
166.6
P10809_1094
195.1
P10809_1106
173.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.1
Samples: 4
Max nTPM: 122.6
Min nTPM: 59.9
RHH5202_R3573
75.1
RHH5230_R3602
59.9
RHH5259_R3631
62.6
RHH5288_R3660
122.6
Effector memory CD8 T-cell nTPM: 86.2
Samples: 4
Max nTPM: 109.4
Min nTPM: 74.0
RHH5203_R3574
109.4
RHH5231_R3603
84.7
RHH5260_R3632
74.0
RHH5289_R3661
76.7
MAIT T-cell nTPM: 79.0
Samples: 4
Max nTPM: 107.0
Min nTPM: 55.1
RHH5233_R3605
80.7
RHH5205_R3576
55.1
RHH5262_R3634
73.2
RHH5297_R3663
107.0
Memory CD4 T-cell TFH nTPM: 114.4
Samples: 4
Max nTPM: 169.8
Min nTPM: 84.0
RHH5300_R3666
107.9
RHH5236_R3608
169.8
RHH5265_R3637
84.0
RHH5208_R3579
95.7
Memory CD4 T-cell Th1 nTPM: 93.0
Samples: 4
Max nTPM: 145.1
Min nTPM: 67.4
RHH5210_R3581
79.9
RHH5302_R3668
145.1
RHH5238_R3610
79.5
RHH5267_R3639
67.4
Memory CD4 T-cell Th1/Th17 nTPM: 117.0
Samples: 4
Max nTPM: 177.2
Min nTPM: 58.3
RHH5303_R3669
177.2
RHH5211_R3582
149.1
RHH5239_R3611
58.3
RHH5268_R3640
83.3
Memory CD4 T-cell Th17 nTPM: 78.5
Samples: 4
Max nTPM: 115.9
Min nTPM: 55.8
RHH5304_R3670
78.9
RHH5212_R3583
115.9
RHH5240_R3612
63.3
RHH5269_R3641
55.8
Memory CD4 T-cell Th2 nTPM: 96.2
Samples: 4
Max nTPM: 120.3
Min nTPM: 73.3
RHH5305_R3671
84.6
RHH5213_R3584
106.4
RHH5241_R3613
120.3
RHH5270_R3642
73.3
Naive CD4 T-cell nTPM: 71.4
Samples: 4
Max nTPM: 98.8
Min nTPM: 49.4
RHH5306_R3672
75.7
RHH5214_R3585
98.8
RHH5242_R3614
61.8
RHH5271_R3643
49.4
Naive CD8 T-cell nTPM: 72.9
Samples: 4
Max nTPM: 96.1
Min nTPM: 48.8
RHH5201_R3572
91.6
RHH5229_R3601
54.9
RHH5258_R3630
96.1
RHH5287_R3659
48.8
Non-Vd2 gdTCR nTPM: 94.7
Samples: 4
Max nTPM: 144.2
Min nTPM: 51.7
RHH5235_R3607
51.7
RHH5264_R3636
144.2
RHH5207_R3578
70.2
RHH5299_R3665
112.5
T-reg nTPM: 99.7
Samples: 4
Max nTPM: 137.0
Min nTPM: 76.1
RHH5301_R3667
108.5
RHH5237_R3609
137.0
RHH5266_R3638
76.1
RHH5209_R3580
77.2
Terminal effector memory CD4 T-cell nTPM: 92.2
Samples: 2
Max nTPM: 113.4
Min nTPM: 70.9
RHH5243_R3615
70.9
RHH5272_R3644
113.4
Terminal effector memory CD8 T-cell nTPM: 107.5
Samples: 4
Max nTPM: 173.6
Min nTPM: 60.6
RHH5232_R3604
88.9
RHH5204_R3575
173.6
RHH5261_R3633
60.6
RHH5296_R3662
106.9
Vd2 gdTCR nTPM: 99.5
Samples: 4
Max nTPM: 135.3
Min nTPM: 67.2
RHH5234_R3606
67.2
RHH5206_R3577
135.3
RHH5263_R3635
77.0
RHH5298_R3664
118.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
