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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6136.8
nTPM
Monaco:
5497.5
nTPM
Schmiedel:
0.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6136.8
HPA sample
nTPM
gdT-cell nTPM: 2187.0
Samples: 6
Max nTPM: 2942.8
Min nTPM: 1579.5
P10809_1007
1883.0
P10809_1022
2707.7
P10809_1041
2942.8
P10809_1060
1579.5
P10809_1077
1701.2
P10809_1098
2307.7
MAIT T-cell nTPM: 4340.4
Samples: 6
Max nTPM: 5121.1
Min nTPM: 3243.9
P10809_1006
3676.0
P10809_1024
5121.1
P10809_1043
4852.3
P10809_1062
4248.2
P10809_1083
3243.9
P10809_1097
4900.8
Memory CD4 T-cell nTPM: 4164.4
Samples: 6
Max nTPM: 5457.2
Min nTPM: 2892.9
P10809_1014
4007.0
P10809_1026
5457.2
P10809_1045
5364.8
P10809_1064
3134.4
P10809_1086
2892.9
P10809_1113
4130.0
Memory CD8 T-cell nTPM: 2824.9
Samples: 5
Max nTPM: 3519.5
Min nTPM: 2256.2
P10809_1012
2915.2
P10809_1027
2705.5
P10809_1046
3519.5
P10809_1065
2256.2
P10809_1111
2728.3
Naive CD4 T-cell nTPM: 6136.8
Samples: 6
Max nTPM: 8658.5
Min nTPM: 4855.5
P10809_1015
4873.6
P10809_1030
6755.4
P10809_1049
8658.5
P10809_1068
6096.4
P10809_1085
4855.5
P10809_1112
5581.6
Naive CD8 T-cell nTPM: 4200.9
Samples: 6
Max nTPM: 5221.2
Min nTPM: 1875.9
P10809_1016
4880.9
P10809_1031
5221.2
P10809_1050
4456.8
P10809_1069
3906.3
P10809_1087
1875.9
P10809_1110
4864.5
T-reg nTPM: 3316.2
Samples: 6
Max nTPM: 4851.2
Min nTPM: 2463.2
P10809_1018
2463.2
P10809_1037
3176.3
P10809_1056
4851.2
P10809_1075
2970.0
P10809_1094
3482.2
P10809_1106
2954.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5497.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3283.8
Samples: 4
Max nTPM: 4111.8
Min nTPM: 1798.1
RHH5202_R3573
3673.0
RHH5230_R3602
4111.8
RHH5259_R3631
1798.1
RHH5288_R3660
3552.1
Effector memory CD8 T-cell nTPM: 1973.1
Samples: 4
Max nTPM: 2394.2
Min nTPM: 1304.8
RHH5203_R3574
2033.8
RHH5231_R3603
2394.2
RHH5260_R3632
1304.8
RHH5289_R3661
2159.6
MAIT T-cell nTPM: 3588.6
Samples: 4
Max nTPM: 4187.2
Min nTPM: 2428.0
RHH5233_R3605
4141.5
RHH5205_R3576
2428.0
RHH5262_R3634
3597.8
RHH5297_R3663
4187.2
Memory CD4 T-cell TFH nTPM: 4083.6
Samples: 4
Max nTPM: 4891.7
Min nTPM: 3527.7
RHH5300_R3666
3958.8
RHH5236_R3608
4891.7
RHH5265_R3637
3527.7
RHH5208_R3579
3956.3
Memory CD4 T-cell Th1 nTPM: 3318.6
Samples: 4
Max nTPM: 4311.4
Min nTPM: 2283.7
RHH5210_R3581
4311.4
RHH5302_R3668
4221.5
RHH5238_R3610
2283.7
RHH5267_R3639
2457.7
Memory CD4 T-cell Th1/Th17 nTPM: 3507.8
Samples: 4
Max nTPM: 4807.6
Min nTPM: 2078.4
RHH5303_R3669
4807.6
RHH5211_R3582
4513.7
RHH5239_R3611
2078.4
RHH5268_R3640
2631.5
Memory CD4 T-cell Th17 nTPM: 3335.8
Samples: 4
Max nTPM: 3967.4
Min nTPM: 2519.1
RHH5304_R3670
3894.7
RHH5212_R3583
3967.4
RHH5240_R3612
2962.1
RHH5269_R3641
2519.1
Memory CD4 T-cell Th2 nTPM: 4385.7
Samples: 4
Max nTPM: 5697.2
Min nTPM: 3564.6
RHH5305_R3671
4175.7
RHH5213_R3584
4105.4
RHH5241_R3613
5697.2
RHH5270_R3642
3564.6
Naive CD4 T-cell nTPM: 5497.5
Samples: 4
Max nTPM: 6292.7
Min nTPM: 4273.4
RHH5306_R3672
6292.7
RHH5214_R3585
5496.1
RHH5242_R3614
5927.6
RHH5271_R3643
4273.4
Naive CD8 T-cell nTPM: 5242.7
Samples: 4
Max nTPM: 6389.8
Min nTPM: 2779.5
RHH5201_R3572
6389.8
RHH5229_R3601
2779.5
RHH5258_R3630
6022.7
RHH5287_R3659
5778.6
Non-Vd2 gdTCR nTPM: 1788.4
Samples: 4
Max nTPM: 2023.2
Min nTPM: 1574.3
RHH5235_R3607
1631.5
RHH5264_R3636
2023.2
RHH5207_R3578
1574.3
RHH5299_R3665
1924.6
T-reg nTPM: 3608.0
Samples: 4
Max nTPM: 4661.9
Min nTPM: 2723.2
RHH5301_R3667
3929.1
RHH5237_R3609
4661.9
RHH5266_R3638
2723.2
RHH5209_R3580
3117.9
Terminal effector memory CD4 T-cell nTPM: 2280.4
Samples: 2
Max nTPM: 2890.3
Min nTPM: 1670.4
RHH5243_R3615
1670.4
RHH5272_R3644
2890.3
Terminal effector memory CD8 T-cell nTPM: 1823.3
Samples: 4
Max nTPM: 2348.4
Min nTPM: 1179.6
RHH5232_R3604
2348.4
RHH5204_R3575
1596.3
RHH5261_R3633
1179.6
RHH5296_R3662
2168.8
Vd2 gdTCR nTPM: 2809.1
Samples: 4
Max nTPM: 3539.9
Min nTPM: 2223.7
RHH5234_R3606
3539.9
RHH5206_R3577
2342.8
RHH5263_R3635
2223.7
RHH5298_R3664
3130.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
