HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:2.3 nTPM
HPA Brain:22.0 nTPM
GTEx:2.3 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:39.2 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059018
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 27.0
2529 Female, age 94, left hemisphere 23.5
1911 Female, age 85, right hemisphere 20.4
2148 Female, age 91, left hemisphere 20.4
2621 Female, age 67, right hemisphere 19.5
1855 Male, age 76, left hemisphere 18.6
Dentate gyrus
nTPM: 20.4
2530 Female, age 94, left hemisphere 23.8
2010 Male, age 76, both hemispheres 23.6
2528 Male, age 74, both hemispheres 19.9
1927 Female, age 91, both hemispheres 19.0
2246 Female, age 85, both hemispheres 18.9
2531 Female, age 67, both hemispheres 17.0
Entorhinal gyrus
nTPM: 19.6
2117 Female, age 91, right hemisphere 26.0
1938 Female, age 85, left hemisphere 21.3
2764 Male, age 80, right hemisphere 20.9
1787 Male, age 76, left hemisphere 19.7
2686 Male, age 75, right hemisphere 16.1
2613 Female, age 94, left hemisphere 13.8
Hippocampus, CA1
nTPM: 22.0
2749 Male, age 80, left hemisphere 29.6
2527 Male, age 74, both hemispheres 23.4
1873 Female, age 85, both hemispheres 22.0
2082 Female, age 91, right hemisphere 17.8
2045 Male, age 76, both hemispheres 17.1
Hippocampus, CA2
nTPM: 21.3
1963 Male, age 80, left hemisphere 24.2
2249 Male, age 74, both hemispheres 23.8
1892 Male, age 76, both hemispheres 22.2
2437 Female, age 94, left hemisphere 20.1
1940 Female, age 85, left hemisphere 19.0
2113 Female, age 91, right hemisphere 18.3
Hippocampus, CA3
nTPM: 20.3
2137 Male, age 80, left hemisphere 23.8
1867 Male, age 76, both hemispheres 23.0
1891 Female, age 85, both hemispheres 22.0
2436 Male, age 74, both hemispheres 20.8
2620 Female, age 94, left hemisphere 16.8
2861 Female, age 67, both hemispheres 15.3
Parahippocampal cortex
nTPM: 18.7
1990 Female, age 91, right hemisphere 21.5
1850 Male, age 80, both hemispheres 21.0
1933 Female, age 85, both hemispheres 20.4
2018 Male, age 76, both hemispheres 20.4
2245 Female, age 91, both hemispheres 20.1
2250 Female, age 67, right hemisphere 19.4
2532 Female, age 72, left hemisphere 17.7
2692 Male, age 74, both hemispheres 16.6
2693 Female, age 94, both hemispheres 15.2
2622 Female, age 67, right hemisphere 14.4
Perirhinal gyrus
nTPM: 20.5
1794 Male, age 80, right hemisphere 22.4
1841 Female, age 85, right hemisphere 21.6
1847 Female, age 91, left hemisphere 21.3
2521 Female, age 94, right hemisphere 18.6
2848 Male, age 76, right hemisphere 18.6
Subiculum
nTPM: 21.8
1977 Female, age 85, both hemispheres 24.0
1901 Male, age 80, both hemispheres 23.8
2042 Male, age 76, both hemispheres 22.2
2438 Female, age 94, left hemisphere 21.5
2729 Female, age 91, right hemisphere 19.5
2619 Male, age 74, both hemispheres 19.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.3
Samples: 197

Max nTPM: 20.3
Min nTPM: 0.0
Std nTPM: 4.4
Median nTPM: 0.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 20.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 18.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 17.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 16.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.1
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 14.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 14.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 13.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.4
FF:10169-103B7 60 years, female 129.8
FF:10153-102I9 76 years, female 101.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 4.1
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 2.0
Sample C Male 1.2
Sample D Male 4.1
Dorsal hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.0
Sample A Female 3.0
Sample B Female 3.4
Sample C Male 5.7
Sample D Male 4.0
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.5
Sample A Female 3.7
Sample B Female 3.5
Sample C Male 3.5
Sample D Male 1.5
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.7
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 4.0
Sample C Male 5.7
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.4
Samples: 4

Max nTPM: 43.1
Min nTPM: 26.9
Sample A Male 41.3
Sample B Male 43.1
Sample C Female 34.3
Sample D Female 26.9
Hippocampal formation
nTPM: 39.2
Samples: 4

Max nTPM: 47.5
Min nTPM: 35.1
Sample A Male 36.4
Sample B Male 37.9
Sample C Female 35.1
Sample D Female 47.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
199214 Antisense, RP_040604_02_E05, Mouse strain C57BL/6J (56 days, male) 10.1

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