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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
333.4
nTPM
Monaco:
277.8
nTPM
Schmiedel:
222.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
333.4
HPA sample
nTPM
gdT-cell nTPM: 221.9
Samples: 6
Max nTPM: 274.8
Min nTPM: 179.0
P10809_1007
185.0
P10809_1022
256.0
P10809_1041
274.8
P10809_1060
189.8
P10809_1077
247.0
P10809_1098
179.0
MAIT T-cell nTPM: 209.7
Samples: 6
Max nTPM: 255.7
Min nTPM: 147.7
P10809_1006
147.7
P10809_1024
255.7
P10809_1043
228.4
P10809_1062
187.0
P10809_1083
234.8
P10809_1097
204.7
Memory CD4 T-cell nTPM: 250.3
Samples: 6
Max nTPM: 288.1
Min nTPM: 217.6
P10809_1014
217.6
P10809_1026
288.1
P10809_1045
265.6
P10809_1064
246.1
P10809_1086
251.5
P10809_1113
232.8
Memory CD8 T-cell nTPM: 232.0
Samples: 5
Max nTPM: 295.3
Min nTPM: 183.1
P10809_1012
206.3
P10809_1027
295.3
P10809_1046
241.6
P10809_1065
233.5
P10809_1111
183.1
Naive CD4 T-cell nTPM: 180.2
Samples: 6
Max nTPM: 205.3
Min nTPM: 134.2
P10809_1015
134.2
P10809_1030
194.2
P10809_1049
205.3
P10809_1068
201.9
P10809_1085
189.8
P10809_1112
155.8
Naive CD8 T-cell nTPM: 165.9
Samples: 6
Max nTPM: 203.8
Min nTPM: 119.7
P10809_1016
119.7
P10809_1031
167.3
P10809_1050
187.7
P10809_1069
193.1
P10809_1087
203.8
P10809_1110
123.5
T-reg nTPM: 333.4
Samples: 6
Max nTPM: 418.3
Min nTPM: 300.8
P10809_1018
300.8
P10809_1037
301.2
P10809_1056
418.3
P10809_1075
321.2
P10809_1094
357.7
P10809_1106
301.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
277.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 177.1
Samples: 4
Max nTPM: 203.1
Min nTPM: 121.6
RHH5202_R3573
190.6
RHH5230_R3602
203.1
RHH5259_R3631
121.6
RHH5288_R3660
193.0
Effector memory CD8 T-cell nTPM: 277.8
Samples: 4
Max nTPM: 317.8
Min nTPM: 242.1
RHH5203_R3574
246.2
RHH5231_R3603
317.8
RHH5260_R3632
242.1
RHH5289_R3661
305.0
MAIT T-cell nTPM: 181.0
Samples: 4
Max nTPM: 198.3
Min nTPM: 163.7
RHH5233_R3605
173.7
RHH5205_R3576
163.7
RHH5262_R3634
188.2
RHH5297_R3663
198.3
Memory CD4 T-cell TFH nTPM: 199.5
Samples: 4
Max nTPM: 274.7
Min nTPM: 148.7
RHH5300_R3666
148.7
RHH5236_R3608
274.7
RHH5265_R3637
189.2
RHH5208_R3579
185.5
Memory CD4 T-cell Th1 nTPM: 195.0
Samples: 4
Max nTPM: 224.0
Min nTPM: 159.9
RHH5210_R3581
198.4
RHH5302_R3668
224.0
RHH5238_R3610
159.9
RHH5267_R3639
197.8
Memory CD4 T-cell Th1/Th17 nTPM: 228.4
Samples: 4
Max nTPM: 316.7
Min nTPM: 159.8
RHH5303_R3669
221.5
RHH5211_R3582
316.7
RHH5239_R3611
159.8
RHH5268_R3640
215.4
Memory CD4 T-cell Th17 nTPM: 230.1
Samples: 4
Max nTPM: 284.3
Min nTPM: 168.5
RHH5304_R3670
214.3
RHH5212_R3583
253.2
RHH5240_R3612
284.3
RHH5269_R3641
168.5
Memory CD4 T-cell Th2 nTPM: 248.5
Samples: 4
Max nTPM: 280.5
Min nTPM: 201.9
RHH5305_R3671
253.4
RHH5213_R3584
280.5
RHH5241_R3613
258.1
RHH5270_R3642
201.9
Naive CD4 T-cell nTPM: 147.3
Samples: 4
Max nTPM: 194.9
Min nTPM: 124.8
RHH5306_R3672
129.8
RHH5214_R3585
194.9
RHH5242_R3614
139.5
RHH5271_R3643
124.8
Naive CD8 T-cell nTPM: 118.9
Samples: 4
Max nTPM: 163.9
Min nTPM: 97.1
RHH5201_R3572
163.9
RHH5229_R3601
97.1
RHH5258_R3630
110.3
RHH5287_R3659
104.1
Non-Vd2 gdTCR nTPM: 221.2
Samples: 4
Max nTPM: 245.5
Min nTPM: 196.0
RHH5235_R3607
196.0
RHH5264_R3636
245.5
RHH5207_R3578
211.7
RHH5299_R3665
231.7
T-reg nTPM: 218.6
Samples: 4
Max nTPM: 268.2
Min nTPM: 176.8
RHH5301_R3667
216.1
RHH5237_R3609
268.2
RHH5266_R3638
176.8
RHH5209_R3580
213.3
Terminal effector memory CD4 T-cell nTPM: 200.0
Samples: 2
Max nTPM: 200.0
Min nTPM: 200.0
RHH5243_R3615
200.0
RHH5272_R3644
200.0
Terminal effector memory CD8 T-cell nTPM: 232.9
Samples: 4
Max nTPM: 267.2
Min nTPM: 213.2
RHH5232_R3604
231.4
RHH5204_R3575
267.2
RHH5261_R3633
219.7
RHH5296_R3662
213.2
Vd2 gdTCR nTPM: 215.6
Samples: 4
Max nTPM: 285.1
Min nTPM: 171.0
RHH5234_R3606
195.5
RHH5206_R3577
285.1
RHH5263_R3635
210.8
RHH5298_R3664
171.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
