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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.3
nTPM
Monaco:
54.9
nTPM
Schmiedel:
0.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.3
HPA sample
nTPM
gdT-cell nTPM: 46.0
Samples: 6
Max nTPM: 57.5
Min nTPM: 36.6
P10809_1007
36.7
P10809_1022
57.5
P10809_1041
55.4
P10809_1060
41.3
P10809_1077
36.6
P10809_1098
48.5
MAIT T-cell nTPM: 43.9
Samples: 6
Max nTPM: 58.4
Min nTPM: 24.5
P10809_1006
24.5
P10809_1024
47.3
P10809_1043
58.4
P10809_1062
42.9
P10809_1083
37.0
P10809_1097
53.2
Memory CD4 T-cell nTPM: 61.0
Samples: 6
Max nTPM: 79.0
Min nTPM: 44.6
P10809_1014
44.6
P10809_1026
79.0
P10809_1045
67.9
P10809_1064
60.2
P10809_1086
49.3
P10809_1113
65.2
Memory CD8 T-cell nTPM: 60.4
Samples: 5
Max nTPM: 78.6
Min nTPM: 33.6
P10809_1012
33.6
P10809_1027
78.6
P10809_1046
73.0
P10809_1065
58.5
P10809_1111
58.1
Naive CD4 T-cell nTPM: 62.1
Samples: 6
Max nTPM: 91.9
Min nTPM: 36.3
P10809_1015
36.3
P10809_1030
60.3
P10809_1049
91.9
P10809_1068
71.4
P10809_1085
56.0
P10809_1112
56.8
Naive CD8 T-cell nTPM: 52.0
Samples: 6
Max nTPM: 67.8
Min nTPM: 38.1
P10809_1016
39.9
P10809_1031
67.8
P10809_1050
62.9
P10809_1069
52.1
P10809_1087
38.1
P10809_1110
50.9
T-reg nTPM: 84.3
Samples: 6
Max nTPM: 148.1
Min nTPM: 42.5
P10809_1018
42.5
P10809_1037
95.7
P10809_1056
148.1
P10809_1075
62.6
P10809_1094
85.3
P10809_1106
71.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 37.1
Samples: 4
Max nTPM: 54.7
Min nTPM: 16.2
RHH5202_R3573
16.2
RHH5230_R3602
40.4
RHH5259_R3631
36.9
RHH5288_R3660
54.7
Effector memory CD8 T-cell nTPM: 29.8
Samples: 4
Max nTPM: 38.5
Min nTPM: 16.7
RHH5203_R3574
16.7
RHH5231_R3603
28.5
RHH5260_R3632
35.5
RHH5289_R3661
38.5
MAIT T-cell nTPM: 43.1
Samples: 4
Max nTPM: 58.3
Min nTPM: 26.6
RHH5233_R3605
26.6
RHH5205_R3576
38.3
RHH5262_R3634
58.3
RHH5297_R3663
49.3
Memory CD4 T-cell TFH nTPM: 44.2
Samples: 4
Max nTPM: 58.9
Min nTPM: 32.6
RHH5300_R3666
32.6
RHH5236_R3608
58.9
RHH5265_R3637
44.1
RHH5208_R3579
41.3
Memory CD4 T-cell Th1 nTPM: 48.2
Samples: 4
Max nTPM: 78.9
Min nTPM: 32.0
RHH5210_R3581
43.1
RHH5302_R3668
78.9
RHH5238_R3610
38.6
RHH5267_R3639
32.0
Memory CD4 T-cell Th1/Th17 nTPM: 36.2
Samples: 4
Max nTPM: 62.8
Min nTPM: 11.7
RHH5303_R3669
62.8
RHH5211_R3582
38.3
RHH5239_R3611
32.1
RHH5268_R3640
11.7
Memory CD4 T-cell Th17 nTPM: 42.3
Samples: 4
Max nTPM: 45.7
Min nTPM: 40.3
RHH5304_R3670
42.2
RHH5212_R3583
45.7
RHH5240_R3612
40.3
RHH5269_R3641
40.8
Memory CD4 T-cell Th2 nTPM: 43.2
Samples: 4
Max nTPM: 52.6
Min nTPM: 23.7
RHH5305_R3671
47.7
RHH5213_R3584
48.8
RHH5241_R3613
52.6
RHH5270_R3642
23.7
Naive CD4 T-cell nTPM: 28.7
Samples: 4
Max nTPM: 40.2
Min nTPM: 19.1
RHH5306_R3672
22.1
RHH5214_R3585
40.2
RHH5242_R3614
33.5
RHH5271_R3643
19.1
Naive CD8 T-cell nTPM: 35.4
Samples: 4
Max nTPM: 43.7
Min nTPM: 30.0
RHH5201_R3572
30.0
RHH5229_R3601
32.0
RHH5258_R3630
35.7
RHH5287_R3659
43.7
Non-Vd2 gdTCR nTPM: 39.0
Samples: 4
Max nTPM: 47.4
Min nTPM: 29.0
RHH5235_R3607
29.0
RHH5264_R3636
33.8
RHH5207_R3578
45.6
RHH5299_R3665
47.4
T-reg nTPM: 42.4
Samples: 4
Max nTPM: 76.1
Min nTPM: 22.5
RHH5301_R3667
76.1
RHH5237_R3609
25.1
RHH5266_R3638
22.5
RHH5209_R3580
46.0
Terminal effector memory CD4 T-cell nTPM: 39.6
Samples: 2
Max nTPM: 58.2
Min nTPM: 20.9
RHH5243_R3615
20.9
RHH5272_R3644
58.2
Terminal effector memory CD8 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 83.8
Min nTPM: 44.1
RHH5232_R3604
46.6
RHH5204_R3575
83.8
RHH5261_R3633
44.1
RHH5296_R3662
45.2
Vd2 gdTCR nTPM: 54.9
Samples: 4
Max nTPM: 120.2
Min nTPM: 20.8
RHH5234_R3606
37.4
RHH5206_R3577
41.3
RHH5263_R3635
20.8
RHH5298_R3664
120.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
