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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.2
nTPM
Monaco:
175.9
nTPM
Schmiedel:
245.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.2
HPA sample
nTPM
gdT-cell nTPM: 11.4
Samples: 6
Max nTPM: 16.2
Min nTPM: 8.2
P10809_1007
11.7
P10809_1022
14.6
P10809_1041
8.2
P10809_1060
8.3
P10809_1077
16.2
P10809_1098
9.6
MAIT T-cell nTPM: 15.2
Samples: 6
Max nTPM: 19.3
Min nTPM: 8.3
P10809_1006
18.8
P10809_1024
17.2
P10809_1043
8.7
P10809_1062
8.3
P10809_1083
19.1
P10809_1097
19.3
Memory CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 18.0
Min nTPM: 7.8
P10809_1014
18.0
P10809_1026
7.8
P10809_1045
13.3
P10809_1064
11.4
P10809_1086
14.3
P10809_1113
16.2
Memory CD8 T-cell nTPM: 12.8
Samples: 5
Max nTPM: 14.7
Min nTPM: 10.9
P10809_1012
13.2
P10809_1027
11.2
P10809_1046
10.9
P10809_1065
14.7
P10809_1111
14.1
Naive CD4 T-cell nTPM: 14.3
Samples: 6
Max nTPM: 21.4
Min nTPM: 7.6
P10809_1015
21.4
P10809_1030
14.3
P10809_1049
7.6
P10809_1068
17.7
P10809_1085
9.8
P10809_1112
15.1
Naive CD8 T-cell nTPM: 12.8
Samples: 6
Max nTPM: 19.9
Min nTPM: 3.6
P10809_1016
16.9
P10809_1031
3.6
P10809_1050
16.2
P10809_1069
8.3
P10809_1087
19.9
P10809_1110
11.8
T-reg nTPM: 13.5
Samples: 6
Max nTPM: 24.2
Min nTPM: 4.7
P10809_1018
20.1
P10809_1037
24.2
P10809_1056
4.7
P10809_1075
11.7
P10809_1094
8.3
P10809_1106
11.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.1
Samples: 4
Max nTPM: 208.5
Min nTPM: 142.1
RHH5202_R3573
208.5
RHH5230_R3602
146.3
RHH5259_R3631
175.5
RHH5288_R3660
142.1
Effector memory CD8 T-cell nTPM: 170.0
Samples: 4
Max nTPM: 208.2
Min nTPM: 144.9
RHH5203_R3574
208.2
RHH5231_R3603
156.5
RHH5260_R3632
144.9
RHH5289_R3661
170.5
MAIT T-cell nTPM: 175.9
Samples: 4
Max nTPM: 196.8
Min nTPM: 149.3
RHH5233_R3605
149.3
RHH5205_R3576
196.8
RHH5262_R3634
189.9
RHH5297_R3663
167.5
Memory CD4 T-cell TFH nTPM: 151.5
Samples: 4
Max nTPM: 186.2
Min nTPM: 122.5
RHH5300_R3666
149.2
RHH5236_R3608
122.5
RHH5265_R3637
148.0
RHH5208_R3579
186.2
Memory CD4 T-cell Th1 nTPM: 148.4
Samples: 4
Max nTPM: 154.4
Min nTPM: 138.2
RHH5210_R3581
138.2
RHH5302_R3668
153.6
RHH5238_R3610
154.4
RHH5267_R3639
147.5
Memory CD4 T-cell Th1/Th17 nTPM: 160.4
Samples: 4
Max nTPM: 205.6
Min nTPM: 137.8
RHH5303_R3669
158.8
RHH5211_R3582
139.5
RHH5239_R3611
205.6
RHH5268_R3640
137.8
Memory CD4 T-cell Th17 nTPM: 170.9
Samples: 4
Max nTPM: 223.7
Min nTPM: 142.6
RHH5304_R3670
172.7
RHH5212_R3583
142.6
RHH5240_R3612
223.7
RHH5269_R3641
144.7
Memory CD4 T-cell Th2 nTPM: 154.4
Samples: 4
Max nTPM: 175.9
Min nTPM: 133.5
RHH5305_R3671
133.5
RHH5213_R3584
143.4
RHH5241_R3613
175.9
RHH5270_R3642
164.9
Naive CD4 T-cell nTPM: 152.8
Samples: 4
Max nTPM: 161.1
Min nTPM: 148.2
RHH5306_R3672
161.1
RHH5214_R3585
148.7
RHH5242_R3614
153.1
RHH5271_R3643
148.2
Naive CD8 T-cell nTPM: 148.1
Samples: 4
Max nTPM: 173.4
Min nTPM: 102.7
RHH5201_R3572
173.4
RHH5229_R3601
159.2
RHH5258_R3630
102.7
RHH5287_R3659
157.0
Non-Vd2 gdTCR nTPM: 167.1
Samples: 4
Max nTPM: 218.8
Min nTPM: 134.3
RHH5235_R3607
134.3
RHH5264_R3636
178.0
RHH5207_R3578
218.8
RHH5299_R3665
137.3
T-reg nTPM: 130.5
Samples: 4
Max nTPM: 135.9
Min nTPM: 125.7
RHH5301_R3667
133.5
RHH5237_R3609
127.0
RHH5266_R3638
125.7
RHH5209_R3580
135.9
Terminal effector memory CD4 T-cell nTPM: 160.4
Samples: 2
Max nTPM: 172.8
Min nTPM: 147.9
RHH5243_R3615
147.9
RHH5272_R3644
172.8
Terminal effector memory CD8 T-cell nTPM: 166.8
Samples: 4
Max nTPM: 194.5
Min nTPM: 146.1
RHH5232_R3604
194.5
RHH5204_R3575
146.1
RHH5261_R3633
163.8
RHH5296_R3662
162.6
Vd2 gdTCR nTPM: 144.8
Samples: 4
Max nTPM: 169.5
Min nTPM: 118.7
RHH5234_R3606
142.2
RHH5206_R3577
148.8
RHH5263_R3635
169.5
RHH5298_R3664
118.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
