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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
365.5
nTPM
Monaco:
9.5
nTPM
Schmiedel:
0.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
365.5
HPA sample
nTPM
gdT-cell nTPM: 285.1
Samples: 6
Max nTPM: 384.0
Min nTPM: 209.5
P10809_1007
331.8
P10809_1022
259.5
P10809_1041
384.0
P10809_1060
209.5
P10809_1077
301.0
P10809_1098
224.9
MAIT T-cell nTPM: 349.0
Samples: 6
Max nTPM: 421.9
Min nTPM: 271.0
P10809_1006
353.9
P10809_1024
405.1
P10809_1043
421.9
P10809_1062
354.6
P10809_1083
271.0
P10809_1097
287.2
Memory CD4 T-cell nTPM: 364.7
Samples: 6
Max nTPM: 479.8
Min nTPM: 287.9
P10809_1014
427.9
P10809_1026
479.8
P10809_1045
358.8
P10809_1064
300.2
P10809_1086
287.9
P10809_1113
333.5
Memory CD8 T-cell nTPM: 332.5
Samples: 5
Max nTPM: 433.3
Min nTPM: 249.1
P10809_1012
433.3
P10809_1027
322.2
P10809_1046
377.3
P10809_1065
280.7
P10809_1111
249.1
Naive CD4 T-cell nTPM: 365.5
Samples: 6
Max nTPM: 417.8
Min nTPM: 303.7
P10809_1015
337.9
P10809_1030
410.6
P10809_1049
417.8
P10809_1068
399.4
P10809_1085
323.6
P10809_1112
303.7
Naive CD8 T-cell nTPM: 359.2
Samples: 6
Max nTPM: 447.7
Min nTPM: 252.9
P10809_1016
447.7
P10809_1031
384.1
P10809_1050
398.1
P10809_1069
386.9
P10809_1087
252.9
P10809_1110
285.2
T-reg nTPM: 275.3
Samples: 6
Max nTPM: 307.5
Min nTPM: 241.8
P10809_1018
277.4
P10809_1037
307.5
P10809_1056
282.0
P10809_1075
275.7
P10809_1094
267.5
P10809_1106
241.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
9.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3.3
Samples: 4
Max nTPM: 13.1
Min nTPM: 0.0
RHH5202_R3573
0.0
RHH5230_R3602
13.1
RHH5259_R3631
0.0
RHH5288_R3660
0.0
Effector memory CD8 T-cell nTPM: 2.3
Samples: 4
Max nTPM: 9.2
Min nTPM: 0.0
RHH5203_R3574
0.0
RHH5231_R3603
0.0
RHH5260_R3632
9.2
RHH5289_R3661
0.0
MAIT T-cell nTPM: 1.2
Samples: 4
Max nTPM: 4.9
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
0.0
RHH5262_R3634
0.0
RHH5297_R3663
4.9
Memory CD4 T-cell TFH nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5300_R3666
0.0
RHH5236_R3608
0.0
RHH5265_R3637
0.0
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 9.6
Samples: 4
Max nTPM: 38.2
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
0.0
RHH5238_R3610
38.2
RHH5267_R3639
0.0
Memory CD4 T-cell Th1/Th17 nTPM: 4.3
Samples: 4
Max nTPM: 10.8
Min nTPM: 0.0
RHH5303_R3669
4.3
RHH5211_R3582
0.0
RHH5239_R3611
2.0
RHH5268_R3640
10.8
Memory CD4 T-cell Th17 nTPM: 3.7
Samples: 4
Max nTPM: 14.6
Min nTPM: 0.0
RHH5304_R3670
0.0
RHH5212_R3583
0.0
RHH5240_R3612
0.0
RHH5269_R3641
14.6
Memory CD4 T-cell Th2 nTPM: 4.3
Samples: 4
Max nTPM: 11.6
Min nTPM: 0.0
RHH5305_R3671
0.0
RHH5213_R3584
0.0
RHH5241_R3613
11.6
RHH5270_R3642
5.7
Naive CD4 T-cell nTPM: 3.0
Samples: 4
Max nTPM: 5.6
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
5.6
RHH5242_R3614
4.8
RHH5271_R3643
1.5
Naive CD8 T-cell nTPM: 4.5
Samples: 4
Max nTPM: 12.9
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
4.9
RHH5258_R3630
0.0
RHH5287_R3659
12.9
Non-Vd2 gdTCR nTPM: 1.6
Samples: 4
Max nTPM: 6.4
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
6.4
T-reg nTPM: 0.3
Samples: 4
Max nTPM: 1.0
Min nTPM: 0.0
RHH5301_R3667
0.0
RHH5237_R3609
1.0
RHH5266_R3638
0.0
RHH5209_R3580
0.0
Terminal effector memory CD4 T-cell nTPM: 3.0
Samples: 2
Max nTPM: 6.0
Min nTPM: 0.0
RHH5243_R3615
6.0
RHH5272_R3644
0.0
Terminal effector memory CD8 T-cell nTPM: 0.6
Samples: 4
Max nTPM: 2.5
Min nTPM: 0.0
RHH5232_R3604
0.0
RHH5204_R3575
0.0
RHH5261_R3633
2.5
RHH5296_R3662
0.0
Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
0.0
RHH5263_R3635
0.0
RHH5298_R3664
0.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
