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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.0
nTPM
Monaco:
35.1
nTPM
Schmiedel:
21.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.0
HPA sample
nTPM
gdT-cell nTPM: 66.1
Samples: 6
Max nTPM: 80.3
Min nTPM: 46.8
P10809_1007
46.8
P10809_1022
79.8
P10809_1041
80.3
P10809_1060
57.8
P10809_1077
71.1
P10809_1098
60.5
MAIT T-cell nTPM: 78.0
Samples: 6
Max nTPM: 114.1
Min nTPM: 52.5
P10809_1006
52.5
P10809_1024
114.1
P10809_1043
98.0
P10809_1062
70.4
P10809_1083
58.6
P10809_1097
74.6
Memory CD4 T-cell nTPM: 71.0
Samples: 6
Max nTPM: 91.2
Min nTPM: 53.8
P10809_1014
53.8
P10809_1026
91.2
P10809_1045
81.5
P10809_1064
65.1
P10809_1086
67.1
P10809_1113
67.1
Memory CD8 T-cell nTPM: 71.7
Samples: 5
Max nTPM: 91.2
Min nTPM: 51.8
P10809_1012
51.8
P10809_1027
87.5
P10809_1046
91.2
P10809_1065
61.2
P10809_1111
66.9
Naive CD4 T-cell nTPM: 70.6
Samples: 6
Max nTPM: 99.8
Min nTPM: 42.2
P10809_1015
42.2
P10809_1030
92.6
P10809_1049
99.8
P10809_1068
60.4
P10809_1085
65.3
P10809_1112
63.5
Naive CD8 T-cell nTPM: 67.3
Samples: 6
Max nTPM: 98.0
Min nTPM: 44.9
P10809_1016
44.9
P10809_1031
98.0
P10809_1050
70.4
P10809_1069
68.1
P10809_1087
60.0
P10809_1110
62.2
T-reg nTPM: 68.7
Samples: 6
Max nTPM: 98.1
Min nTPM: 42.3
P10809_1018
42.3
P10809_1037
84.3
P10809_1056
98.1
P10809_1075
54.1
P10809_1094
79.4
P10809_1106
53.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.8
Samples: 4
Max nTPM: 51.8
Min nTPM: 12.3
RHH5202_R3573
12.3
RHH5230_R3602
21.5
RHH5259_R3631
13.5
RHH5288_R3660
51.8
Effector memory CD8 T-cell nTPM: 15.8
Samples: 4
Max nTPM: 22.4
Min nTPM: 11.5
RHH5203_R3574
11.5
RHH5231_R3603
16.9
RHH5260_R3632
22.4
RHH5289_R3661
12.3
MAIT T-cell nTPM: 29.7
Samples: 4
Max nTPM: 60.3
Min nTPM: 5.5
RHH5233_R3605
28.6
RHH5205_R3576
5.5
RHH5262_R3634
24.4
RHH5297_R3663
60.3
Memory CD4 T-cell TFH nTPM: 25.5
Samples: 4
Max nTPM: 41.9
Min nTPM: 15.0
RHH5300_R3666
25.8
RHH5236_R3608
41.9
RHH5265_R3637
19.3
RHH5208_R3579
15.0
Memory CD4 T-cell Th1 nTPM: 34.4
Samples: 4
Max nTPM: 59.7
Min nTPM: 16.5
RHH5210_R3581
32.7
RHH5302_R3668
59.7
RHH5238_R3610
16.5
RHH5267_R3639
28.8
Memory CD4 T-cell Th1/Th17 nTPM: 34.6
Samples: 4
Max nTPM: 48.5
Min nTPM: 29.8
RHH5303_R3669
48.5
RHH5211_R3582
30.2
RHH5239_R3611
29.8
RHH5268_R3640
29.8
Memory CD4 T-cell Th17 nTPM: 20.6
Samples: 4
Max nTPM: 26.7
Min nTPM: 12.9
RHH5304_R3670
23.9
RHH5212_R3583
26.7
RHH5240_R3612
12.9
RHH5269_R3641
18.9
Memory CD4 T-cell Th2 nTPM: 32.9
Samples: 4
Max nTPM: 41.1
Min nTPM: 17.0
RHH5305_R3671
35.9
RHH5213_R3584
37.7
RHH5241_R3613
41.1
RHH5270_R3642
17.0
Naive CD4 T-cell nTPM: 28.3
Samples: 4
Max nTPM: 45.4
Min nTPM: 7.3
RHH5306_R3672
36.7
RHH5214_R3585
45.4
RHH5242_R3614
23.8
RHH5271_R3643
7.3
Naive CD8 T-cell nTPM: 22.3
Samples: 4
Max nTPM: 24.7
Min nTPM: 19.7
RHH5201_R3572
22.3
RHH5229_R3601
22.3
RHH5258_R3630
19.7
RHH5287_R3659
24.7
Non-Vd2 gdTCR nTPM: 27.5
Samples: 4
Max nTPM: 50.0
Min nTPM: 13.8
RHH5235_R3607
16.7
RHH5264_R3636
29.4
RHH5207_R3578
13.8
RHH5299_R3665
50.0
T-reg nTPM: 23.2
Samples: 4
Max nTPM: 42.4
Min nTPM: 6.7
RHH5301_R3667
42.4
RHH5237_R3609
22.6
RHH5266_R3638
6.7
RHH5209_R3580
21.1
Terminal effector memory CD4 T-cell nTPM: 17.9
Samples: 2
Max nTPM: 23.2
Min nTPM: 12.5
RHH5243_R3615
12.5
RHH5272_R3644
23.2
Terminal effector memory CD8 T-cell nTPM: 35.1
Samples: 4
Max nTPM: 58.0
Min nTPM: 21.5
RHH5232_R3604
21.5
RHH5204_R3575
58.0
RHH5261_R3633
28.0
RHH5296_R3662
32.8
Vd2 gdTCR nTPM: 32.8
Samples: 4
Max nTPM: 53.7
Min nTPM: 11.7
RHH5234_R3606
20.9
RHH5206_R3577
44.9
RHH5263_R3635
11.7
RHH5298_R3664
53.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
