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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.9
nTPM
Monaco:
15.7
nTPM
Schmiedel:
0.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.9
HPA sample
nTPM
gdT-cell nTPM: 40.3
Samples: 6
Max nTPM: 53.2
Min nTPM: 23.5
P10809_1007
23.5
P10809_1022
44.5
P10809_1041
42.7
P10809_1060
38.0
P10809_1077
40.1
P10809_1098
53.2
MAIT T-cell nTPM: 49.2
Samples: 6
Max nTPM: 62.0
Min nTPM: 28.8
P10809_1006
28.8
P10809_1024
60.6
P10809_1043
62.0
P10809_1062
40.3
P10809_1083
43.9
P10809_1097
59.6
Memory CD4 T-cell nTPM: 52.8
Samples: 6
Max nTPM: 68.5
Min nTPM: 41.6
P10809_1014
41.6
P10809_1026
60.9
P10809_1045
68.5
P10809_1064
42.9
P10809_1086
42.9
P10809_1113
59.9
Memory CD8 T-cell nTPM: 44.4
Samples: 5
Max nTPM: 57.2
Min nTPM: 31.6
P10809_1012
31.6
P10809_1027
38.7
P10809_1046
56.1
P10809_1065
38.2
P10809_1111
57.2
Naive CD4 T-cell nTPM: 60.4
Samples: 6
Max nTPM: 87.7
Min nTPM: 28.8
P10809_1015
28.8
P10809_1030
81.9
P10809_1049
87.7
P10809_1068
53.4
P10809_1085
55.7
P10809_1112
55.0
Naive CD8 T-cell nTPM: 52.4
Samples: 6
Max nTPM: 82.4
Min nTPM: 31.6
P10809_1016
37.8
P10809_1031
82.4
P10809_1050
61.5
P10809_1069
40.8
P10809_1087
31.6
P10809_1110
60.1
T-reg nTPM: 61.9
Samples: 6
Max nTPM: 91.1
Min nTPM: 35.2
P10809_1018
35.2
P10809_1037
51.0
P10809_1056
91.1
P10809_1075
61.5
P10809_1094
56.0
P10809_1106
76.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 21.4
Min nTPM: 5.8
RHH5202_R3573
5.8
RHH5230_R3602
16.3
RHH5259_R3631
13.7
RHH5288_R3660
21.4
Effector memory CD8 T-cell nTPM: 6.1
Samples: 4
Max nTPM: 9.6
Min nTPM: 3.5
RHH5203_R3574
3.5
RHH5231_R3603
3.9
RHH5260_R3632
7.4
RHH5289_R3661
9.6
MAIT T-cell nTPM: 8.5
Samples: 4
Max nTPM: 16.1
Min nTPM: 3.1
RHH5233_R3605
3.1
RHH5205_R3576
3.2
RHH5262_R3634
16.1
RHH5297_R3663
11.6
Memory CD4 T-cell TFH nTPM: 15.1
Samples: 4
Max nTPM: 15.3
Min nTPM: 14.4
RHH5300_R3666
15.3
RHH5236_R3608
15.3
RHH5265_R3637
14.4
RHH5208_R3579
15.2
Memory CD4 T-cell Th1 nTPM: 13.3
Samples: 4
Max nTPM: 15.8
Min nTPM: 9.6
RHH5210_R3581
13.3
RHH5302_R3668
9.6
RHH5238_R3610
15.8
RHH5267_R3639
14.6
Memory CD4 T-cell Th1/Th17 nTPM: 10.9
Samples: 4
Max nTPM: 14.7
Min nTPM: 7.3
RHH5303_R3669
7.3
RHH5211_R3582
14.7
RHH5239_R3611
10.3
RHH5268_R3640
11.4
Memory CD4 T-cell Th17 nTPM: 11.5
Samples: 4
Max nTPM: 13.6
Min nTPM: 5.5
RHH5304_R3670
5.5
RHH5212_R3583
13.4
RHH5240_R3612
13.5
RHH5269_R3641
13.6
Memory CD4 T-cell Th2 nTPM: 14.7
Samples: 4
Max nTPM: 16.3
Min nTPM: 13.2
RHH5305_R3671
16.0
RHH5213_R3584
16.3
RHH5241_R3613
13.4
RHH5270_R3642
13.2
Naive CD4 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 18.3
Min nTPM: 9.9
RHH5306_R3672
12.6
RHH5214_R3585
18.3
RHH5242_R3614
12.7
RHH5271_R3643
9.9
Naive CD8 T-cell nTPM: 13.2
Samples: 4
Max nTPM: 19.1
Min nTPM: 5.4
RHH5201_R3572
5.4
RHH5229_R3601
19.1
RHH5258_R3630
15.3
RHH5287_R3659
12.8
Non-Vd2 gdTCR nTPM: 12.3
Samples: 4
Max nTPM: 19.7
Min nTPM: 6.4
RHH5235_R3607
6.4
RHH5264_R3636
14.7
RHH5207_R3578
8.5
RHH5299_R3665
19.7
T-reg nTPM: 11.5
Samples: 4
Max nTPM: 14.4
Min nTPM: 8.7
RHH5301_R3667
14.4
RHH5237_R3609
13.9
RHH5266_R3638
8.7
RHH5209_R3580
9.1
Terminal effector memory CD4 T-cell nTPM: 9.4
Samples: 2
Max nTPM: 13.8
Min nTPM: 4.9
RHH5243_R3615
4.9
RHH5272_R3644
13.8
Terminal effector memory CD8 T-cell nTPM: 7.8
Samples: 4
Max nTPM: 13.2
Min nTPM: 4.0
RHH5232_R3604
9.8
RHH5204_R3575
13.2
RHH5261_R3633
4.3
RHH5296_R3662
4.0
Vd2 gdTCR nTPM: 15.7
Samples: 4
Max nTPM: 21.6
Min nTPM: 10.3
RHH5234_R3606
13.4
RHH5206_R3577
21.6
RHH5263_R3635
10.3
RHH5298_R3664
17.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
