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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.8
nTPM
Monaco:
304.3
nTPM
Schmiedel:
100.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.8
HPA sample
nTPM
gdT-cell nTPM: 19.9
Samples: 6
Max nTPM: 40.7
Min nTPM: 8.5
P10809_1007
9.7
P10809_1022
8.5
P10809_1041
29.5
P10809_1060
18.6
P10809_1077
40.7
P10809_1098
12.3
MAIT T-cell nTPM: 18.9
Samples: 6
Max nTPM: 31.2
Min nTPM: 10.7
P10809_1006
31.2
P10809_1024
10.7
P10809_1043
14.6
P10809_1062
12.6
P10809_1083
16.4
P10809_1097
27.9
Memory CD4 T-cell nTPM: 2.2
Samples: 6
Max nTPM: 3.0
Min nTPM: 1.1
P10809_1014
1.8
P10809_1026
2.6
P10809_1045
1.8
P10809_1064
1.1
P10809_1086
3.0
P10809_1113
2.8
Memory CD8 T-cell nTPM: 46.6
Samples: 5
Max nTPM: 69.2
Min nTPM: 17.1
P10809_1012
53.0
P10809_1027
53.7
P10809_1046
40.2
P10809_1065
17.1
P10809_1111
69.2
Naive CD4 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 49.5
Min nTPM: 25.1
P10809_1015
36.1
P10809_1030
25.1
P10809_1049
48.0
P10809_1068
32.7
P10809_1085
27.3
P10809_1112
49.5
Naive CD8 T-cell nTPM: 68.8
Samples: 6
Max nTPM: 97.9
Min nTPM: 46.5
P10809_1016
97.9
P10809_1031
46.5
P10809_1050
81.4
P10809_1069
48.5
P10809_1087
59.6
P10809_1110
78.7
T-reg nTPM: 2.1
Samples: 6
Max nTPM: 5.8
Min nTPM: 0.0
P10809_1018
2.3
P10809_1037
0.0
P10809_1056
5.8
P10809_1075
0.5
P10809_1094
2.0
P10809_1106
2.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
304.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 187.5
Samples: 4
Max nTPM: 262.7
Min nTPM: 94.7
RHH5202_R3573
204.3
RHH5230_R3602
94.7
RHH5259_R3631
262.7
RHH5288_R3660
188.1
Effector memory CD8 T-cell nTPM: 154.9
Samples: 4
Max nTPM: 197.9
Min nTPM: 82.0
RHH5203_R3574
179.8
RHH5231_R3603
82.0
RHH5260_R3632
159.8
RHH5289_R3661
197.9
MAIT T-cell nTPM: 116.4
Samples: 4
Max nTPM: 138.2
Min nTPM: 80.1
RHH5233_R3605
138.2
RHH5205_R3576
80.1
RHH5262_R3634
123.9
RHH5297_R3663
123.5
Memory CD4 T-cell TFH nTPM: 10.4
Samples: 4
Max nTPM: 18.0
Min nTPM: 5.7
RHH5300_R3666
9.2
RHH5236_R3608
5.7
RHH5265_R3637
8.6
RHH5208_R3579
18.0
Memory CD4 T-cell Th1 nTPM: 49.7
Samples: 4
Max nTPM: 92.2
Min nTPM: 19.1
RHH5210_R3581
92.2
RHH5302_R3668
42.5
RHH5238_R3610
19.1
RHH5267_R3639
45.0
Memory CD4 T-cell Th1/Th17 nTPM: 6.2
Samples: 4
Max nTPM: 15.9
Min nTPM: 0.7
RHH5303_R3669
15.9
RHH5211_R3582
2.2
RHH5239_R3611
0.7
RHH5268_R3640
6.0
Memory CD4 T-cell Th17 nTPM: 7.8
Samples: 4
Max nTPM: 13.0
Min nTPM: 3.0
RHH5304_R3670
13.0
RHH5212_R3583
3.0
RHH5240_R3612
5.8
RHH5269_R3641
9.2
Memory CD4 T-cell Th2 nTPM: 9.5
Samples: 4
Max nTPM: 16.0
Min nTPM: 3.2
RHH5305_R3671
16.0
RHH5213_R3584
5.9
RHH5241_R3613
3.2
RHH5270_R3642
12.8
Naive CD4 T-cell nTPM: 150.9
Samples: 4
Max nTPM: 220.6
Min nTPM: 90.5
RHH5306_R3672
220.6
RHH5214_R3585
90.5
RHH5242_R3614
131.1
RHH5271_R3643
161.2
Naive CD8 T-cell nTPM: 304.3
Samples: 4
Max nTPM: 384.9
Min nTPM: 244.0
RHH5201_R3572
244.0
RHH5229_R3601
384.9
RHH5258_R3630
291.0
RHH5287_R3659
297.3
Non-Vd2 gdTCR nTPM: 125.9
Samples: 4
Max nTPM: 163.5
Min nTPM: 43.3
RHH5235_R3607
138.0
RHH5264_R3636
163.5
RHH5207_R3578
43.3
RHH5299_R3665
158.7
T-reg nTPM: 33.8
Samples: 4
Max nTPM: 41.0
Min nTPM: 20.6
RHH5301_R3667
39.8
RHH5237_R3609
20.6
RHH5266_R3638
41.0
RHH5209_R3580
33.7
Terminal effector memory CD4 T-cell nTPM: 27.3
Samples: 2
Max nTPM: 54.1
Min nTPM: 0.5
RHH5243_R3615
0.5
RHH5272_R3644
54.1
Terminal effector memory CD8 T-cell nTPM: 131.6
Samples: 4
Max nTPM: 162.3
Min nTPM: 103.9
RHH5232_R3604
124.1
RHH5204_R3575
136.1
RHH5261_R3633
103.9
RHH5296_R3662
162.3
Vd2 gdTCR nTPM: 65.9
Samples: 4
Max nTPM: 107.1
Min nTPM: 14.0
RHH5234_R3606
73.3
RHH5206_R3577
14.0
RHH5263_R3635
69.2
RHH5298_R3664
107.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
