HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.7 nTPM
HPA Brain:24.6 nTPM
GTEx:18.7 nTPM
FANTOM5:16.0 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:24.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045265
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2621 Female, age 67, right hemisphere 31.3
2529 Female, age 94, left hemisphere 26.3
2148 Female, age 91, left hemisphere 21.5
1911 Female, age 85, right hemisphere 20.5
1898 Male, age 80, left hemisphere 20.2
1855 Male, age 76, left hemisphere 16.6
Dentate gyrus
nTPM: 20.8
2530 Female, age 94, left hemisphere 30.8
1927 Female, age 91, both hemispheres 27.5
2531 Female, age 67, both hemispheres 19.5
2010 Male, age 76, both hemispheres 17.5
2246 Female, age 85, both hemispheres 16.4
2528 Male, age 74, both hemispheres 13.0
Entorhinal gyrus
nTPM: 18.1
2686 Male, age 75, right hemisphere 22.7
2613 Female, age 94, left hemisphere 21.3
1787 Male, age 76, left hemisphere 19.1
2764 Male, age 80, right hemisphere 18.3
1938 Female, age 85, left hemisphere 15.0
2117 Female, age 91, right hemisphere 12.5
Hippocampus, CA1
nTPM: 18.3
2749 Male, age 80, left hemisphere 29.7
2527 Male, age 74, both hemispheres 21.8
1873 Female, age 85, both hemispheres 16.5
2082 Female, age 91, right hemisphere 13.2
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 24.6
2437 Female, age 94, left hemisphere 46.5
1963 Male, age 80, left hemisphere 30.0
1892 Male, age 76, both hemispheres 29.8
2249 Male, age 74, both hemispheres 15.3
2113 Female, age 91, right hemisphere 14.2
1940 Female, age 85, left hemisphere 11.8
Hippocampus, CA3
nTPM: 19.2
2861 Female, age 67, both hemispheres 29.9
2137 Male, age 80, left hemisphere 24.2
1867 Male, age 76, both hemispheres 20.8
2620 Female, age 94, left hemisphere 14.7
1891 Female, age 85, both hemispheres 14.0
2436 Male, age 74, both hemispheres 11.7
Parahippocampal cortex
nTPM: 23.0
2622 Female, age 67, right hemisphere 39.8
2245 Female, age 91, both hemispheres 33.9
1990 Female, age 91, right hemisphere 24.4
2250 Female, age 67, right hemisphere 24.4
2693 Female, age 94, both hemispheres 23.2
2532 Female, age 72, left hemisphere 22.8
2692 Male, age 74, both hemispheres 18.3
1933 Female, age 85, both hemispheres 14.5
1850 Male, age 80, both hemispheres 14.2
2018 Male, age 76, both hemispheres 14.0
Perirhinal gyrus
nTPM: 17.7
2521 Female, age 94, right hemisphere 22.8
1794 Male, age 80, right hemisphere 19.7
1841 Female, age 85, right hemisphere 16.2
1847 Female, age 91, left hemisphere 16.0
2848 Male, age 76, right hemisphere 13.8
Subiculum
nTPM: 21.2
2438 Female, age 94, left hemisphere 40.0
2619 Male, age 74, both hemispheres 26.1
1901 Male, age 80, both hemispheres 20.0
1977 Female, age 85, both hemispheres 15.0
2042 Male, age 76, both hemispheres 14.0
2729 Female, age 91, right hemisphere 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.7
Samples: 197

Max nTPM: 65.9
Min nTPM: 0.6
Std nTPM: 12.2
Median nTPM: 16.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 65.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 59.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 56.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 51.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 48.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 47.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 45.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 42.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 41.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.0
FF:10153-102I9 76 years, female 18.5
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.2
Pig sample Sample description nTPM
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 29.3
Min nTPM: 15.1
Sample A Female 29.3
Sample B Female 15.1
Sample C Male 17.5
Sample D Male 16.3
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 28.2
Min nTPM: 18.0
Sample A Female 27.3
Sample B Female 19.9
Sample C Male 28.2
Sample D Male 18.0
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 51.2
Min nTPM: 33.0
Sample A Female 40.4
Sample B Female 51.2
Sample C Male 33.0
Sample D Male 44.0
Ventral hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 27.2
Min nTPM: 14.6
Sample A Female 21.8
Sample B Female 14.6
Sample C Male 27.2
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 30.5
Min nTPM: 19.7
Sample A Male 30.5
Sample B Male 27.7
Sample C Female 20.7
Sample D Female 19.7
Hippocampal formation
nTPM: 20.3
Samples: 4

Max nTPM: 21.6
Min nTPM: 18.1
Sample A Male 18.1
Sample B Male 21.2
Sample C Female 20.4
Sample D Female 21.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
71325444 Antisense, RP_050825_02_H06, Mouse strain C57BL/6J (56 days, male) 1.6
73636035 Antisense, RP_050825_02_H06, Mouse strain C57BL/6J (56 days, male) 0.9

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