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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.8
nTPM
Monaco:
185.8
nTPM
Schmiedel:
44.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.8
HPA sample
nTPM
gdT-cell nTPM: 14.6
Samples: 6
Max nTPM: 16.8
Min nTPM: 11.0
P10809_1007
16.8
P10809_1022
16.4
P10809_1041
13.4
P10809_1060
15.7
P10809_1077
11.0
P10809_1098
14.1
MAIT T-cell nTPM: 16.5
Samples: 6
Max nTPM: 23.5
Min nTPM: 8.8
P10809_1006
23.5
P10809_1024
8.8
P10809_1043
23.0
P10809_1062
13.8
P10809_1083
17.1
P10809_1097
12.5
Memory CD4 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 24.4
Min nTPM: 8.8
P10809_1014
24.4
P10809_1026
11.5
P10809_1045
10.3
P10809_1064
8.8
P10809_1086
9.2
P10809_1113
14.7
Memory CD8 T-cell nTPM: 16.8
Samples: 5
Max nTPM: 32.8
Min nTPM: 7.6
P10809_1012
32.8
P10809_1027
12.7
P10809_1046
15.2
P10809_1065
7.6
P10809_1111
15.8
Naive CD4 T-cell nTPM: 6.5
Samples: 6
Max nTPM: 12.1
Min nTPM: 2.2
P10809_1015
12.1
P10809_1030
5.4
P10809_1049
2.2
P10809_1068
4.4
P10809_1085
3.8
P10809_1112
10.9
Naive CD8 T-cell nTPM: 9.8
Samples: 6
Max nTPM: 14.4
Min nTPM: 5.7
P10809_1016
14.4
P10809_1031
11.6
P10809_1050
8.2
P10809_1069
9.6
P10809_1087
9.0
P10809_1110
5.7
T-reg nTPM: 15.6
Samples: 6
Max nTPM: 30.2
Min nTPM: 6.8
P10809_1018
30.2
P10809_1037
12.4
P10809_1056
6.8
P10809_1075
20.9
P10809_1094
13.9
P10809_1106
9.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 151.6
Samples: 4
Max nTPM: 162.9
Min nTPM: 143.2
RHH5202_R3573
150.1
RHH5230_R3602
162.9
RHH5259_R3631
143.2
RHH5288_R3660
150.0
Effector memory CD8 T-cell nTPM: 134.4
Samples: 4
Max nTPM: 167.8
Min nTPM: 110.0
RHH5203_R3574
129.4
RHH5231_R3603
110.0
RHH5260_R3632
130.5
RHH5289_R3661
167.8
MAIT T-cell nTPM: 137.8
Samples: 4
Max nTPM: 163.1
Min nTPM: 97.7
RHH5233_R3605
135.5
RHH5205_R3576
154.8
RHH5262_R3634
97.7
RHH5297_R3663
163.1
Memory CD4 T-cell TFH nTPM: 134.3
Samples: 4
Max nTPM: 154.2
Min nTPM: 107.9
RHH5300_R3666
154.2
RHH5236_R3608
107.9
RHH5265_R3637
149.1
RHH5208_R3579
125.8
Memory CD4 T-cell Th1 nTPM: 127.5
Samples: 4
Max nTPM: 143.5
Min nTPM: 102.5
RHH5210_R3581
102.5
RHH5302_R3668
143.5
RHH5238_R3610
121.7
RHH5267_R3639
142.3
Memory CD4 T-cell Th1/Th17 nTPM: 169.5
Samples: 4
Max nTPM: 184.1
Min nTPM: 151.9
RHH5303_R3669
184.1
RHH5211_R3582
179.6
RHH5239_R3611
162.5
RHH5268_R3640
151.9
Memory CD4 T-cell Th17 nTPM: 185.8
Samples: 4
Max nTPM: 244.8
Min nTPM: 125.7
RHH5304_R3670
204.5
RHH5212_R3583
168.2
RHH5240_R3612
244.8
RHH5269_R3641
125.7
Memory CD4 T-cell Th2 nTPM: 115.6
Samples: 4
Max nTPM: 143.2
Min nTPM: 88.5
RHH5305_R3671
116.7
RHH5213_R3584
143.2
RHH5241_R3613
88.5
RHH5270_R3642
113.9
Naive CD4 T-cell nTPM: 57.1
Samples: 4
Max nTPM: 92.8
Min nTPM: 35.3
RHH5306_R3672
92.8
RHH5214_R3585
35.3
RHH5242_R3614
58.3
RHH5271_R3643
41.9
Naive CD8 T-cell nTPM: 96.1
Samples: 4
Max nTPM: 124.4
Min nTPM: 70.4
RHH5201_R3572
112.0
RHH5229_R3601
124.4
RHH5258_R3630
70.4
RHH5287_R3659
77.5
Non-Vd2 gdTCR nTPM: 96.7
Samples: 4
Max nTPM: 119.1
Min nTPM: 82.0
RHH5235_R3607
82.0
RHH5264_R3636
119.1
RHH5207_R3578
97.6
RHH5299_R3665
88.0
T-reg nTPM: 106.1
Samples: 4
Max nTPM: 138.5
Min nTPM: 76.7
RHH5301_R3667
109.8
RHH5237_R3609
76.7
RHH5266_R3638
138.5
RHH5209_R3580
99.2
Terminal effector memory CD4 T-cell nTPM: 81.4
Samples: 2
Max nTPM: 88.0
Min nTPM: 74.7
RHH5243_R3615
88.0
RHH5272_R3644
74.7
Terminal effector memory CD8 T-cell nTPM: 112.5
Samples: 4
Max nTPM: 147.4
Min nTPM: 86.3
RHH5232_R3604
121.9
RHH5204_R3575
86.3
RHH5261_R3633
94.5
RHH5296_R3662
147.4
Vd2 gdTCR nTPM: 117.3
Samples: 4
Max nTPM: 124.8
Min nTPM: 109.3
RHH5234_R3606
109.3
RHH5206_R3577
111.7
RHH5263_R3635
124.8
RHH5298_R3664
123.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
