HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.5 nTPM
HPA Brain:12.5 nTPM
GTEx:19.5 nTPM
FANTOM5:8.9 Scaled Tags Per Million
Mouse:13.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
2621 Female, age 67, right hemisphere 14.9
1898 Male, age 80, left hemisphere 14.4
2529 Female, age 94, left hemisphere 13.4
2148 Female, age 91, left hemisphere 12.2
1855 Male, age 76, left hemisphere 11.2
1911 Female, age 85, right hemisphere 9.0
Dentate gyrus
nTPM: 9.9
2530 Female, age 94, left hemisphere 12.6
1927 Female, age 91, both hemispheres 12.3
2528 Male, age 74, both hemispheres 9.1
2246 Female, age 85, both hemispheres 8.9
2531 Female, age 67, both hemispheres 8.9
2010 Male, age 76, both hemispheres 7.5
Entorhinal gyrus
nTPM: 11.6
2613 Female, age 94, left hemisphere 14.6
1787 Male, age 76, left hemisphere 12.3
1938 Female, age 85, left hemisphere 11.4
2117 Female, age 91, right hemisphere 10.7
2764 Male, age 80, right hemisphere 10.5
2686 Male, age 75, right hemisphere 10.0
Hippocampus, CA1
nTPM: 8.6
2082 Female, age 91, right hemisphere 11.6
2749 Male, age 80, left hemisphere 11.1
1873 Female, age 85, both hemispheres 9.9
2527 Male, age 74, both hemispheres 8.1
2045 Male, age 76, both hemispheres 2.5
Hippocampus, CA2
nTPM: 10.5
2437 Female, age 94, left hemisphere 13.7
2249 Male, age 74, both hemispheres 12.3
1963 Male, age 80, left hemisphere 10.8
1892 Male, age 76, both hemispheres 10.7
1940 Female, age 85, left hemisphere 9.0
2113 Female, age 91, right hemisphere 6.6
Hippocampus, CA3
nTPM: 11.2
2620 Female, age 94, left hemisphere 20.1
2436 Male, age 74, both hemispheres 10.7
2861 Female, age 67, both hemispheres 10.1
1891 Female, age 85, both hemispheres 9.9
2137 Male, age 80, left hemisphere 9.4
1867 Male, age 76, both hemispheres 7.0
Parahippocampal cortex
nTPM: 9.6
1850 Male, age 80, both hemispheres 14.5
2692 Male, age 74, both hemispheres 10.8
2622 Female, age 67, right hemisphere 10.7
2532 Female, age 72, left hemisphere 9.5
2693 Female, age 94, both hemispheres 9.3
1990 Female, age 91, right hemisphere 9.1
1933 Female, age 85, both hemispheres 8.7
2018 Male, age 76, both hemispheres 8.4
2245 Female, age 91, both hemispheres 8.0
2250 Female, age 67, right hemisphere 6.7
Perirhinal gyrus
nTPM: 11.1
1794 Male, age 80, right hemisphere 16.2
1847 Female, age 91, left hemisphere 12.7
1841 Female, age 85, right hemisphere 11.6
2848 Male, age 76, right hemisphere 8.5
2521 Female, age 94, right hemisphere 6.3
Subiculum
nTPM: 10.0
2619 Male, age 74, both hemispheres 12.0
1901 Male, age 80, both hemispheres 10.9
2438 Female, age 94, left hemisphere 10.4
2042 Male, age 76, both hemispheres 9.5
1977 Female, age 85, both hemispheres 9.2
2729 Female, age 91, right hemisphere 7.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 53.5
Min nTPM: 7.7
Std nTPM: 7.2
Median nTPM: 18.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 53.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 44.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 44.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 43.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 41.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 38.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 37.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 34.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 32.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 31.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.9
FF:10153-102I9 76 years, female 9.6
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.8
Sample A Male 9.1
Sample B Male 8.8
Sample C Female 11.4
Sample D Female 9.6
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.8
Sample A Male 14.4
Sample B Male 12.8
Sample C Female 13.3
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71210753 Antisense, RP_050810_04_E04, Mouse strain C57BL/6J (56 days, male) 0.3

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