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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
125.1
nTPM
Monaco:
73.0
nTPM
Schmiedel:
0.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.1
HPA sample
nTPM
gdT-cell nTPM: 71.8
Samples: 6
Max nTPM: 83.0
Min nTPM: 56.9
P10809_1007
56.9
P10809_1022
73.3
P10809_1041
83.0
P10809_1060
61.3
P10809_1077
77.2
P10809_1098
78.8
MAIT T-cell nTPM: 72.5
Samples: 6
Max nTPM: 85.8
Min nTPM: 58.2
P10809_1006
58.2
P10809_1024
80.5
P10809_1043
63.8
P10809_1062
84.1
P10809_1083
62.3
P10809_1097
85.8
Memory CD4 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 77.4
Min nTPM: 56.7
P10809_1014
56.7
P10809_1026
67.6
P10809_1045
77.4
P10809_1064
74.2
P10809_1086
70.8
P10809_1113
71.7
Memory CD8 T-cell nTPM: 75.9
Samples: 5
Max nTPM: 84.9
Min nTPM: 60.8
P10809_1012
60.8
P10809_1027
78.6
P10809_1046
74.3
P10809_1065
84.9
P10809_1111
80.8
Naive CD4 T-cell nTPM: 49.5
Samples: 6
Max nTPM: 68.1
Min nTPM: 32.1
P10809_1015
32.1
P10809_1030
48.5
P10809_1049
68.1
P10809_1068
48.4
P10809_1085
45.1
P10809_1112
54.5
Naive CD8 T-cell nTPM: 47.4
Samples: 6
Max nTPM: 69.3
Min nTPM: 30.6
P10809_1016
30.6
P10809_1031
30.6
P10809_1050
56.9
P10809_1069
54.9
P10809_1087
69.3
P10809_1110
42.3
T-reg nTPM: 125.1
Samples: 6
Max nTPM: 153.8
Min nTPM: 80.9
P10809_1018
80.9
P10809_1037
114.3
P10809_1056
122.8
P10809_1075
136.1
P10809_1094
153.8
P10809_1106
142.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 45.5
Samples: 4
Max nTPM: 55.4
Min nTPM: 31.0
RHH5202_R3573
53.0
RHH5230_R3602
42.7
RHH5259_R3631
31.0
RHH5288_R3660
55.4
Effector memory CD8 T-cell nTPM: 57.9
Samples: 4
Max nTPM: 82.0
Min nTPM: 24.6
RHH5203_R3574
78.2
RHH5231_R3603
82.0
RHH5260_R3632
46.8
RHH5289_R3661
24.6
MAIT T-cell nTPM: 55.9
Samples: 4
Max nTPM: 73.6
Min nTPM: 43.4
RHH5233_R3605
50.4
RHH5205_R3576
43.4
RHH5262_R3634
56.0
RHH5297_R3663
73.6
Memory CD4 T-cell TFH nTPM: 65.6
Samples: 4
Max nTPM: 112.0
Min nTPM: 45.2
RHH5300_R3666
59.4
RHH5236_R3608
112.0
RHH5265_R3637
45.8
RHH5208_R3579
45.2
Memory CD4 T-cell Th1 nTPM: 49.3
Samples: 4
Max nTPM: 69.1
Min nTPM: 38.9
RHH5210_R3581
43.4
RHH5302_R3668
69.1
RHH5238_R3610
45.9
RHH5267_R3639
38.9
Memory CD4 T-cell Th1/Th17 nTPM: 46.8
Samples: 4
Max nTPM: 74.4
Min nTPM: 27.3
RHH5303_R3669
48.7
RHH5211_R3582
74.4
RHH5239_R3611
27.3
RHH5268_R3640
36.7
Memory CD4 T-cell Th17 nTPM: 43.5
Samples: 4
Max nTPM: 78.9
Min nTPM: 19.1
RHH5304_R3670
43.5
RHH5212_R3583
78.9
RHH5240_R3612
19.1
RHH5269_R3641
32.4
Memory CD4 T-cell Th2 nTPM: 49.5
Samples: 4
Max nTPM: 59.1
Min nTPM: 30.9
RHH5305_R3671
50.5
RHH5213_R3584
57.3
RHH5241_R3613
59.1
RHH5270_R3642
30.9
Naive CD4 T-cell nTPM: 45.4
Samples: 4
Max nTPM: 54.8
Min nTPM: 35.7
RHH5306_R3672
44.6
RHH5214_R3585
54.8
RHH5242_R3614
35.7
RHH5271_R3643
46.4
Naive CD8 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 53.0
Min nTPM: 18.8
RHH5201_R3572
18.8
RHH5229_R3601
28.8
RHH5258_R3630
53.0
RHH5287_R3659
39.2
Non-Vd2 gdTCR nTPM: 60.5
Samples: 4
Max nTPM: 81.2
Min nTPM: 31.3
RHH5235_R3607
31.3
RHH5264_R3636
78.3
RHH5207_R3578
51.1
RHH5299_R3665
81.2
T-reg nTPM: 53.4
Samples: 4
Max nTPM: 78.3
Min nTPM: 35.3
RHH5301_R3667
78.3
RHH5237_R3609
52.1
RHH5266_R3638
35.3
RHH5209_R3580
47.7
Terminal effector memory CD4 T-cell nTPM: 50.5
Samples: 2
Max nTPM: 62.1
Min nTPM: 38.9
RHH5243_R3615
38.9
RHH5272_R3644
62.1
Terminal effector memory CD8 T-cell nTPM: 73.0
Samples: 4
Max nTPM: 122.4
Min nTPM: 41.5
RHH5232_R3604
83.1
RHH5204_R3575
122.4
RHH5261_R3633
45.1
RHH5296_R3662
41.5
Vd2 gdTCR nTPM: 60.0
Samples: 4
Max nTPM: 92.1
Min nTPM: 40.3
RHH5234_R3606
40.3
RHH5206_R3577
92.1
RHH5263_R3635
44.8
RHH5298_R3664
62.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
