HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.9 nTPM
HPA Brain:75.6 nTPM
GTEx:59.9 nTPM
FANTOM5:219.8 Scaled Tags Per Million
Pig:188.6 nTPM
Mouse:436.8 nTPM
Allen mouse:30.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
1898 Male, age 80, left hemisphere 80.3
2529 Female, age 94, left hemisphere 79.5
2148 Female, age 91, left hemisphere 70.7
2621 Female, age 67, right hemisphere 67.5
1855 Male, age 76, left hemisphere 62.7
1911 Female, age 85, right hemisphere 51.4
Dentate gyrus
nTPM: 68.9
2530 Female, age 94, left hemisphere 93.9
2010 Male, age 76, both hemispheres 68.8
1927 Female, age 91, both hemispheres 66.6
2531 Female, age 67, both hemispheres 64.4
2246 Female, age 85, both hemispheres 62.4
2528 Male, age 74, both hemispheres 57.4
Entorhinal gyrus
nTPM: 75.6
2686 Male, age 75, right hemisphere 90.5
2117 Female, age 91, right hemisphere 80.0
2764 Male, age 80, right hemisphere 78.9
1787 Male, age 76, left hemisphere 73.8
1938 Female, age 85, left hemisphere 66.6
2613 Female, age 94, left hemisphere 64.0
Hippocampus, CA1
nTPM: 67.8
2749 Male, age 80, left hemisphere 90.2
2045 Male, age 76, both hemispheres 64.3
1873 Female, age 85, both hemispheres 62.4
2082 Female, age 91, right hemisphere 61.7
2527 Male, age 74, both hemispheres 60.7
Hippocampus, CA2
nTPM: 74.3
1892 Male, age 76, both hemispheres 88.6
1963 Male, age 80, left hemisphere 86.1
1940 Female, age 85, left hemisphere 73.9
2437 Female, age 94, left hemisphere 73.6
2113 Female, age 91, right hemisphere 65.6
2249 Male, age 74, both hemispheres 57.8
Hippocampus, CA3
nTPM: 66.5
1867 Male, age 76, both hemispheres 83.3
2137 Male, age 80, left hemisphere 69.9
2861 Female, age 67, both hemispheres 67.6
2620 Female, age 94, left hemisphere 66.6
1891 Female, age 85, both hemispheres 63.5
2436 Male, age 74, both hemispheres 48.0
Parahippocampal cortex
nTPM: 67.8
2245 Female, age 91, both hemispheres 76.4
1850 Male, age 80, both hemispheres 76.1
2692 Male, age 74, both hemispheres 75.0
1990 Female, age 91, right hemisphere 74.4
2532 Female, age 72, left hemisphere 72.2
1933 Female, age 85, both hemispheres 64.7
2018 Male, age 76, both hemispheres 62.2
2250 Female, age 67, right hemisphere 60.9
2622 Female, age 67, right hemisphere 59.1
2693 Female, age 94, both hemispheres 57.4
Perirhinal gyrus
nTPM: 70.6
1847 Female, age 91, left hemisphere 79.2
1794 Male, age 80, right hemisphere 74.4
2848 Male, age 76, right hemisphere 71.8
1841 Female, age 85, right hemisphere 65.9
2521 Female, age 94, right hemisphere 61.5
Subiculum
nTPM: 66.9
2438 Female, age 94, left hemisphere 77.2
1901 Male, age 80, both hemispheres 73.7
1977 Female, age 85, both hemispheres 68.3
2729 Female, age 91, right hemisphere 61.6
2042 Male, age 76, both hemispheres 60.5
2619 Male, age 74, both hemispheres 60.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.9
Samples: 197

Max nTPM: 109.9
Min nTPM: 31.7
Std nTPM: 13.6
Median nTPM: 57.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 109.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 106.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 102.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 101.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 95.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 94.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 91.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 90.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 89.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 85.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 219.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 219.8
FF:10169-103B7 60 years, female 247.1
FF:10153-102I9 76 years, female 192.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 188.6
Pig sample Sample description nTPM
Subiculum
nTPM: 178.4
Samples: 4

Max nTPM: 237.1
Min nTPM: 145.6
Sample A Female 237.1
Sample B Female 166.5
Sample C Male 164.5
Sample D Male 145.6
Dorsal hippocampus
nTPM: 175.0
Samples: 4

Max nTPM: 225.1
Min nTPM: 125.3
Sample A Female 225.1
Sample B Female 165.4
Sample C Male 184.2
Sample D Male 125.3
Entorhinal cortex
nTPM: 188.6
Samples: 4

Max nTPM: 208.0
Min nTPM: 167.3
Sample A Female 199.6
Sample B Female 208.0
Sample C Male 179.4
Sample D Male 167.3
Ventral hippocampus
nTPM: 169.3
Samples: 4

Max nTPM: 200.7
Min nTPM: 131.5
Sample A Female 187.8
Sample B Female 131.5
Sample C Male 200.7
Sample D Male 157.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 436.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 436.8
Samples: 4

Max nTPM: 477.4
Min nTPM: 394.5
Sample A Male 434.2
Sample B Male 441.0
Sample C Female 394.5
Sample D Female 477.4
Hippocampal formation
nTPM: 370.9
Samples: 4

Max nTPM: 413.5
Min nTPM: 332.7
Sample A Male 361.2
Sample B Male 376.2
Sample C Female 413.5
Sample D Female 332.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 30.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 30.3
564758 Antisense, RP_040826_01_D03, Mouse strain C57BL/6J (56 days, male) 30.3

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