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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2163.0
nTPM
Monaco:
1462.2
nTPM
Schmiedel:
44.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2163.0
HPA sample
nTPM
gdT-cell nTPM: 1116.0
Samples: 6
Max nTPM: 1431.5
Min nTPM: 902.9
P10809_1007
1431.5
P10809_1022
1001.4
P10809_1041
1189.2
P10809_1060
902.9
P10809_1077
1071.2
P10809_1098
1100.0
MAIT T-cell nTPM: 2163.0
Samples: 6
Max nTPM: 2410.3
Min nTPM: 1847.3
P10809_1006
2177.1
P10809_1024
2410.3
P10809_1043
2037.3
P10809_1062
2162.1
P10809_1083
1847.3
P10809_1097
2343.9
Memory CD4 T-cell nTPM: 1837.5
Samples: 6
Max nTPM: 2305.4
Min nTPM: 1455.5
P10809_1014
2305.4
P10809_1026
2040.7
P10809_1045
1804.8
P10809_1064
1498.0
P10809_1086
1455.5
P10809_1113
1920.3
Memory CD8 T-cell nTPM: 1485.6
Samples: 5
Max nTPM: 1660.7
Min nTPM: 1339.1
P10809_1012
1660.7
P10809_1027
1534.5
P10809_1046
1462.7
P10809_1065
1339.1
P10809_1111
1431.2
Naive CD4 T-cell nTPM: 2007.2
Samples: 6
Max nTPM: 2623.8
Min nTPM: 1588.2
P10809_1015
2623.8
P10809_1030
2294.0
P10809_1049
1596.9
P10809_1068
2072.7
P10809_1085
1588.2
P10809_1112
1867.4
Naive CD8 T-cell nTPM: 1774.4
Samples: 6
Max nTPM: 2892.5
Min nTPM: 1153.9
P10809_1016
2892.5
P10809_1031
1808.6
P10809_1050
1633.1
P10809_1069
1489.7
P10809_1087
1153.9
P10809_1110
1668.8
T-reg nTPM: 1556.6
Samples: 6
Max nTPM: 1761.4
Min nTPM: 1242.1
P10809_1018
1452.8
P10809_1037
1761.4
P10809_1056
1242.1
P10809_1075
1626.7
P10809_1094
1692.8
P10809_1106
1563.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1462.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1112.3
Samples: 4
Max nTPM: 1355.0
Min nTPM: 665.4
RHH5202_R3573
665.4
RHH5230_R3602
1217.3
RHH5259_R3631
1211.3
RHH5288_R3660
1355.0
Effector memory CD8 T-cell nTPM: 458.7
Samples: 4
Max nTPM: 592.3
Min nTPM: 343.6
RHH5203_R3574
472.2
RHH5231_R3603
426.6
RHH5260_R3632
592.3
RHH5289_R3661
343.6
MAIT T-cell nTPM: 1196.8
Samples: 4
Max nTPM: 1541.6
Min nTPM: 909.7
RHH5233_R3605
909.7
RHH5205_R3576
1139.0
RHH5262_R3634
1197.0
RHH5297_R3663
1541.6
Memory CD4 T-cell TFH nTPM: 1034.7
Samples: 4
Max nTPM: 1317.2
Min nTPM: 707.3
RHH5300_R3666
1317.2
RHH5236_R3608
1252.7
RHH5265_R3637
861.5
RHH5208_R3579
707.3
Memory CD4 T-cell Th1 nTPM: 1379.7
Samples: 4
Max nTPM: 2007.5
Min nTPM: 739.2
RHH5210_R3581
739.2
RHH5302_R3668
2007.5
RHH5238_R3610
1551.7
RHH5267_R3639
1220.5
Memory CD4 T-cell Th1/Th17 nTPM: 1238.3
Samples: 4
Max nTPM: 1430.0
Min nTPM: 869.4
RHH5303_R3669
1430.0
RHH5211_R3582
869.4
RHH5239_R3611
1286.2
RHH5268_R3640
1367.5
Memory CD4 T-cell Th17 nTPM: 1088.7
Samples: 4
Max nTPM: 1586.1
Min nTPM: 886.3
RHH5304_R3670
1586.1
RHH5212_R3583
886.3
RHH5240_R3612
940.8
RHH5269_R3641
941.7
Memory CD4 T-cell Th2 nTPM: 1244.3
Samples: 4
Max nTPM: 1721.0
Min nTPM: 963.8
RHH5305_R3671
1721.0
RHH5213_R3584
995.9
RHH5241_R3613
1296.3
RHH5270_R3642
963.8
Naive CD4 T-cell nTPM: 1462.2
Samples: 4
Max nTPM: 1987.9
Min nTPM: 1182.3
RHH5306_R3672
1987.9
RHH5214_R3585
1487.4
RHH5242_R3614
1182.3
RHH5271_R3643
1191.3
Naive CD8 T-cell nTPM: 1240.9
Samples: 4
Max nTPM: 1486.4
Min nTPM: 959.5
RHH5201_R3572
959.5
RHH5229_R3601
1345.8
RHH5258_R3630
1171.9
RHH5287_R3659
1486.4
Non-Vd2 gdTCR nTPM: 669.8
Samples: 4
Max nTPM: 936.9
Min nTPM: 474.9
RHH5235_R3607
701.5
RHH5264_R3636
474.9
RHH5207_R3578
565.9
RHH5299_R3665
936.9
T-reg nTPM: 1135.7
Samples: 4
Max nTPM: 1789.9
Min nTPM: 817.9
RHH5301_R3667
1789.9
RHH5237_R3609
817.9
RHH5266_R3638
1005.6
RHH5209_R3580
929.5
Terminal effector memory CD4 T-cell nTPM: 590.5
Samples: 2
Max nTPM: 593.0
Min nTPM: 587.9
RHH5243_R3615
587.9
RHH5272_R3644
593.0
Terminal effector memory CD8 T-cell nTPM: 807.0
Samples: 4
Max nTPM: 1426.3
Min nTPM: 432.3
RHH5232_R3604
432.3
RHH5204_R3575
1426.3
RHH5261_R3633
680.4
RHH5296_R3662
689.1
Vd2 gdTCR nTPM: 1288.4
Samples: 4
Max nTPM: 1852.3
Min nTPM: 855.6
RHH5234_R3606
982.2
RHH5206_R3577
1463.3
RHH5263_R3635
855.6
RHH5298_R3664
1852.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.