HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.7 nTPM
HPA Brain:32.9 nTPM
GTEx:22.7 nTPM
FANTOM5:90.1 Scaled Tags Per Million
Pig:5.2 nTPM
Mouse:3.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
1911 Female, age 85, right hemisphere 27.7
1898 Male, age 80, left hemisphere 24.9
2148 Female, age 91, left hemisphere 23.0
2529 Female, age 94, left hemisphere 22.9
2621 Female, age 67, right hemisphere 22.5
1855 Male, age 76, left hemisphere 22.4
Dentate gyrus
nTPM: 23.0
2531 Female, age 67, both hemispheres 33.0
2530 Female, age 94, left hemisphere 29.5
2010 Male, age 76, both hemispheres 20.4
2528 Male, age 74, both hemispheres 20.2
2246 Female, age 85, both hemispheres 19.5
1927 Female, age 91, both hemispheres 15.4
Entorhinal gyrus
nTPM: 22.9
2613 Female, age 94, left hemisphere 37.3
1938 Female, age 85, left hemisphere 24.6
1787 Male, age 76, left hemisphere 23.3
2117 Female, age 91, right hemisphere 21.7
2764 Male, age 80, right hemisphere 20.2
2686 Male, age 75, right hemisphere 10.2
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 39.5
2045 Male, age 76, both hemispheres 25.0
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 20.5
2082 Female, age 91, right hemisphere 18.1
Hippocampus, CA2
nTPM: 19.4
2249 Male, age 74, both hemispheres 23.7
2113 Female, age 91, right hemisphere 21.9
2437 Female, age 94, left hemisphere 21.4
1940 Female, age 85, left hemisphere 18.4
1963 Male, age 80, left hemisphere 17.3
1892 Male, age 76, both hemispheres 13.5
Hippocampus, CA3
nTPM: 32.9
2137 Male, age 80, left hemisphere 56.0
2620 Female, age 94, left hemisphere 54.8
2861 Female, age 67, both hemispheres 24.2
1891 Female, age 85, both hemispheres 24.0
1867 Male, age 76, both hemispheres 21.3
2436 Male, age 74, both hemispheres 17.1
Parahippocampal cortex
nTPM: 17.9
2245 Female, age 91, both hemispheres 25.5
2018 Male, age 76, both hemispheres 23.5
2692 Male, age 74, both hemispheres 20.8
2693 Female, age 94, both hemispheres 20.1
2532 Female, age 72, left hemisphere 19.3
1850 Male, age 80, both hemispheres 19.0
1933 Female, age 85, both hemispheres 16.5
1990 Female, age 91, right hemisphere 15.7
2250 Female, age 67, right hemisphere 11.8
2622 Female, age 67, right hemisphere 7.3
Perirhinal gyrus
nTPM: 17.3
2521 Female, age 94, right hemisphere 20.8
1847 Female, age 91, left hemisphere 19.6
1794 Male, age 80, right hemisphere 17.2
2848 Male, age 76, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.1
Subiculum
nTPM: 24.1
2042 Male, age 76, both hemispheres 36.3
1901 Male, age 80, both hemispheres 36.0
2729 Female, age 91, right hemisphere 21.3
1977 Female, age 85, both hemispheres 19.3
2619 Male, age 74, both hemispheres 17.9
2438 Female, age 94, left hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 59.4
Min nTPM: 0.8
Std nTPM: 11.0
Median nTPM: 21.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 56.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 51.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 50.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 50.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 45.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 44.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 43.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.1
FF:10169-103B7 60 years, female 125.6
FF:10153-102I9 76 years, female 54.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.2
Pig sample Sample description nTPM
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 4.1
Sample C Male 4.6
Sample D Male 4.9
Dorsal hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.3
Sample A Female 6.1
Sample B Female 4.3
Sample C Male 5.3
Sample D Male 5.3
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.9
Sample A Female 4.7
Sample B Female 4.1
Sample C Male 3.9
Sample D Male 5.9
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.9
Sample A Female 4.9
Sample B Female 5.0
Sample C Male 3.9
Sample D Male 4.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.3
Sample A Male 3.0
Sample B Male 2.3
Sample C Female 2.8
Sample D Female 2.8
Hippocampal formation
nTPM: 3.1
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.5
Sample A Male 2.9
Sample B Male 2.5
Sample C Female 3.7
Sample D Female 3.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70300061 Antisense, RP_050602_04_B10, Mouse strain C57BL/6J (56 days, male) 0.1

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