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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
793.6
nTPM
Monaco:
2965.8
nTPM
Schmiedel:
4894.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
793.6
HPA sample
nTPM
gdT-cell nTPM: 793.6
Samples: 6
Max nTPM: 1008.1
Min nTPM: 667.5
P10809_1007
897.7
P10809_1022
1008.1
P10809_1041
750.1
P10809_1060
683.5
P10809_1077
667.5
P10809_1098
754.7
MAIT T-cell nTPM: 730.8
Samples: 6
Max nTPM: 965.1
Min nTPM: 606.3
P10809_1006
965.1
P10809_1024
816.5
P10809_1043
651.5
P10809_1062
671.5
P10809_1083
606.3
P10809_1097
674.0
Memory CD4 T-cell nTPM: 670.6
Samples: 6
Max nTPM: 892.6
Min nTPM: 580.7
P10809_1014
892.6
P10809_1026
625.6
P10809_1045
679.5
P10809_1064
587.5
P10809_1086
580.7
P10809_1113
657.5
Memory CD8 T-cell nTPM: 710.1
Samples: 5
Max nTPM: 972.2
Min nTPM: 607.4
P10809_1012
972.2
P10809_1027
667.7
P10809_1046
681.0
P10809_1065
622.1
P10809_1111
607.4
Naive CD4 T-cell nTPM: 651.7
Samples: 6
Max nTPM: 923.8
Min nTPM: 480.6
P10809_1015
923.8
P10809_1030
683.2
P10809_1049
480.6
P10809_1068
629.1
P10809_1085
495.4
P10809_1112
698.3
Naive CD8 T-cell nTPM: 710.5
Samples: 6
Max nTPM: 927.6
Min nTPM: 597.2
P10809_1016
927.6
P10809_1031
786.1
P10809_1050
691.8
P10809_1069
597.2
P10809_1087
607.0
P10809_1110
653.5
T-reg nTPM: 676.1
Samples: 6
Max nTPM: 885.9
Min nTPM: 470.6
P10809_1018
885.9
P10809_1037
695.4
P10809_1056
470.6
P10809_1075
645.0
P10809_1094
582.2
P10809_1106
777.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2965.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2132.4
Samples: 4
Max nTPM: 2549.8
Min nTPM: 1817.0
RHH5202_R3573
1817.0
RHH5230_R3602
2102.9
RHH5259_R3631
2549.8
RHH5288_R3660
2060.0
Effector memory CD8 T-cell nTPM: 1909.1
Samples: 4
Max nTPM: 2278.4
Min nTPM: 1416.8
RHH5203_R3574
1416.8
RHH5231_R3603
1736.8
RHH5260_R3632
2204.4
RHH5289_R3661
2278.4
MAIT T-cell nTPM: 2466.4
Samples: 4
Max nTPM: 2532.3
Min nTPM: 2352.8
RHH5233_R3605
2352.8
RHH5205_R3576
2482.9
RHH5262_R3634
2532.3
RHH5297_R3663
2497.4
Memory CD4 T-cell TFH nTPM: 1738.3
Samples: 4
Max nTPM: 2118.1
Min nTPM: 1164.2
RHH5300_R3666
1846.5
RHH5236_R3608
1164.2
RHH5265_R3637
2118.1
RHH5208_R3579
1824.3
Memory CD4 T-cell Th1 nTPM: 2337.6
Samples: 4
Max nTPM: 2791.0
Min nTPM: 2110.5
RHH5210_R3581
2110.5
RHH5302_R3668
2252.5
RHH5238_R3610
2196.2
RHH5267_R3639
2791.0
Memory CD4 T-cell Th1/Th17 nTPM: 2617.1
Samples: 4
Max nTPM: 3086.6
Min nTPM: 2061.4
RHH5303_R3669
2491.9
RHH5211_R3582
2061.4
RHH5239_R3611
3086.6
RHH5268_R3640
2828.3
Memory CD4 T-cell Th17 nTPM: 2485.0
Samples: 4
Max nTPM: 2801.0
Min nTPM: 2102.0
RHH5304_R3670
2801.0
RHH5212_R3583
2102.0
RHH5240_R3612
2672.9
RHH5269_R3641
2364.1
Memory CD4 T-cell Th2 nTPM: 2731.8
Samples: 4
Max nTPM: 2863.0
Min nTPM: 2613.1
RHH5305_R3671
2716.0
RHH5213_R3584
2863.0
RHH5241_R3613
2613.1
RHH5270_R3642
2734.9
Naive CD4 T-cell nTPM: 2615.9
Samples: 4
Max nTPM: 3155.5
Min nTPM: 1955.4
RHH5306_R3672
2727.8
RHH5214_R3585
1955.4
RHH5242_R3614
2624.7
RHH5271_R3643
3155.5
Naive CD8 T-cell nTPM: 2685.2
Samples: 4
Max nTPM: 2900.4
Min nTPM: 2460.5
RHH5201_R3572
2750.1
RHH5229_R3601
2629.9
RHH5258_R3630
2460.5
RHH5287_R3659
2900.4
Non-Vd2 gdTCR nTPM: 2320.1
Samples: 4
Max nTPM: 2676.3
Min nTPM: 1967.9
RHH5235_R3607
2676.3
RHH5264_R3636
1967.9
RHH5207_R3578
2345.8
RHH5299_R3665
2290.4
T-reg nTPM: 2024.0
Samples: 4
Max nTPM: 2430.2
Min nTPM: 1513.0
RHH5301_R3667
2100.4
RHH5237_R3609
1513.0
RHH5266_R3638
2430.2
RHH5209_R3580
2052.2
Terminal effector memory CD4 T-cell nTPM: 2965.8
Samples: 2
Max nTPM: 3128.9
Min nTPM: 2802.7
RHH5243_R3615
3128.9
RHH5272_R3644
2802.7
Terminal effector memory CD8 T-cell nTPM: 2452.5
Samples: 4
Max nTPM: 3068.0
Min nTPM: 1721.6
RHH5232_R3604
2498.0
RHH5204_R3575
1721.6
RHH5261_R3633
3068.0
RHH5296_R3662
2522.2
Vd2 gdTCR nTPM: 2411.9
Samples: 4
Max nTPM: 2706.5
Min nTPM: 2226.0
RHH5234_R3606
2361.3
RHH5206_R3577
2353.8
RHH5263_R3635
2706.5
RHH5298_R3664
2226.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.