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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
117.0
nTPM
Monaco:
375.5
nTPM
Schmiedel:
747.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.0
HPA sample
nTPM
gdT-cell nTPM: 112.5
Samples: 6
Max nTPM: 162.8
Min nTPM: 53.7
P10809_1007
105.5
P10809_1022
135.5
P10809_1041
162.8
P10809_1060
53.7
P10809_1077
90.6
P10809_1098
126.9
MAIT T-cell nTPM: 99.9
Samples: 6
Max nTPM: 136.4
Min nTPM: 71.5
P10809_1006
115.2
P10809_1024
71.5
P10809_1043
113.0
P10809_1062
74.1
P10809_1083
89.2
P10809_1097
136.4
Memory CD4 T-cell nTPM: 82.8
Samples: 6
Max nTPM: 108.3
Min nTPM: 48.4
P10809_1014
100.3
P10809_1026
78.4
P10809_1045
108.3
P10809_1064
87.1
P10809_1086
74.0
P10809_1113
48.4
Memory CD8 T-cell nTPM: 117.0
Samples: 5
Max nTPM: 132.9
Min nTPM: 109.4
P10809_1012
113.0
P10809_1027
109.4
P10809_1046
132.9
P10809_1065
110.0
P10809_1111
119.8
Naive CD4 T-cell nTPM: 112.4
Samples: 6
Max nTPM: 129.8
Min nTPM: 100.5
P10809_1015
100.5
P10809_1030
101.0
P10809_1049
125.6
P10809_1068
129.8
P10809_1085
105.0
P10809_1112
112.7
Naive CD8 T-cell nTPM: 106.1
Samples: 6
Max nTPM: 122.7
Min nTPM: 63.6
P10809_1016
98.3
P10809_1031
117.7
P10809_1050
122.7
P10809_1069
117.7
P10809_1087
63.6
P10809_1110
116.5
T-reg nTPM: 78.4
Samples: 6
Max nTPM: 90.6
Min nTPM: 44.2
P10809_1018
90.5
P10809_1037
85.0
P10809_1056
89.4
P10809_1075
70.4
P10809_1094
44.2
P10809_1106
90.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
375.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 228.8
Samples: 4
Max nTPM: 333.3
Min nTPM: 119.2
RHH5202_R3573
119.2
RHH5230_R3602
266.8
RHH5259_R3631
333.3
RHH5288_R3660
195.8
Effector memory CD8 T-cell nTPM: 293.9
Samples: 4
Max nTPM: 410.8
Min nTPM: 170.5
RHH5203_R3574
264.0
RHH5231_R3603
330.2
RHH5260_R3632
410.8
RHH5289_R3661
170.5
MAIT T-cell nTPM: 293.4
Samples: 4
Max nTPM: 366.4
Min nTPM: 212.1
RHH5233_R3605
212.1
RHH5205_R3576
357.9
RHH5262_R3634
366.4
RHH5297_R3663
237.3
Memory CD4 T-cell TFH nTPM: 232.3
Samples: 4
Max nTPM: 311.0
Min nTPM: 113.4
RHH5300_R3666
240.8
RHH5236_R3608
311.0
RHH5265_R3637
263.9
RHH5208_R3579
113.4
Memory CD4 T-cell Th1 nTPM: 276.1
Samples: 4
Max nTPM: 369.2
Min nTPM: 165.4
RHH5210_R3581
217.3
RHH5302_R3668
165.4
RHH5238_R3610
369.2
RHH5267_R3639
352.6
Memory CD4 T-cell Th1/Th17 nTPM: 295.7
Samples: 4
Max nTPM: 417.6
Min nTPM: 109.0
RHH5303_R3669
109.0
RHH5211_R3582
338.3
RHH5239_R3611
417.6
RHH5268_R3640
317.9
Memory CD4 T-cell Th17 nTPM: 242.1
Samples: 4
Max nTPM: 289.5
Min nTPM: 157.8
RHH5304_R3670
157.8
RHH5212_R3583
289.5
RHH5240_R3612
247.5
RHH5269_R3641
273.7
Memory CD4 T-cell Th2 nTPM: 243.5
Samples: 4
Max nTPM: 306.2
Min nTPM: 146.3
RHH5305_R3671
233.3
RHH5213_R3584
306.2
RHH5241_R3613
146.3
RHH5270_R3642
288.3
Naive CD4 T-cell nTPM: 287.4
Samples: 4
Max nTPM: 297.5
Min nTPM: 277.6
RHH5306_R3672
277.6
RHH5214_R3585
292.7
RHH5242_R3614
281.8
RHH5271_R3643
297.5
Naive CD8 T-cell nTPM: 274.3
Samples: 4
Max nTPM: 360.2
Min nTPM: 128.6
RHH5201_R3572
128.6
RHH5229_R3601
360.2
RHH5258_R3630
283.5
RHH5287_R3659
325.0
Non-Vd2 gdTCR nTPM: 336.3
Samples: 4
Max nTPM: 432.2
Min nTPM: 260.0
RHH5235_R3607
432.2
RHH5264_R3636
358.8
RHH5207_R3578
260.0
RHH5299_R3665
294.1
T-reg nTPM: 276.0
Samples: 4
Max nTPM: 324.6
Min nTPM: 227.0
RHH5301_R3667
227.0
RHH5237_R3609
324.6
RHH5266_R3638
273.1
RHH5209_R3580
279.2
Terminal effector memory CD4 T-cell nTPM: 375.5
Samples: 2
Max nTPM: 409.7
Min nTPM: 341.3
RHH5243_R3615
409.7
RHH5272_R3644
341.3
Terminal effector memory CD8 T-cell nTPM: 326.9
Samples: 4
Max nTPM: 454.0
Min nTPM: 179.6
RHH5232_R3604
337.4
RHH5204_R3575
336.7
RHH5261_R3633
454.0
RHH5296_R3662
179.6
Vd2 gdTCR nTPM: 342.1
Samples: 4
Max nTPM: 409.7
Min nTPM: 305.4
RHH5234_R3606
329.6
RHH5206_R3577
323.7
RHH5263_R3635
409.7
RHH5298_R3664
305.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.