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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.1
nTPM
Monaco:
245.1
nTPM
Schmiedel:
229.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.1
HPA sample
nTPM
gdT-cell nTPM: 79.0
Samples: 6
Max nTPM: 133.6
Min nTPM: 57.3
P10809_1007
57.3
P10809_1022
133.6
P10809_1041
84.9
P10809_1060
66.1
P10809_1077
59.2
P10809_1098
73.1
MAIT T-cell nTPM: 86.3
Samples: 6
Max nTPM: 124.0
Min nTPM: 59.4
P10809_1006
79.3
P10809_1024
124.0
P10809_1043
78.5
P10809_1062
78.4
P10809_1083
59.4
P10809_1097
98.0
Memory CD4 T-cell nTPM: 73.5
Samples: 6
Max nTPM: 97.8
Min nTPM: 58.5
P10809_1014
62.5
P10809_1026
81.5
P10809_1045
97.8
P10809_1064
58.5
P10809_1086
64.3
P10809_1113
76.2
Memory CD8 T-cell nTPM: 74.9
Samples: 5
Max nTPM: 84.9
Min nTPM: 67.3
P10809_1012
70.4
P10809_1027
84.9
P10809_1046
77.5
P10809_1065
74.5
P10809_1111
67.3
Naive CD4 T-cell nTPM: 78.4
Samples: 6
Max nTPM: 88.5
Min nTPM: 61.3
P10809_1015
71.1
P10809_1030
77.6
P10809_1049
86.7
P10809_1068
85.1
P10809_1085
61.3
P10809_1112
88.5
Naive CD8 T-cell nTPM: 66.5
Samples: 6
Max nTPM: 77.5
Min nTPM: 55.7
P10809_1016
62.7
P10809_1031
55.7
P10809_1050
64.9
P10809_1069
77.5
P10809_1087
65.1
P10809_1110
73.2
T-reg nTPM: 93.1
Samples: 6
Max nTPM: 113.9
Min nTPM: 68.6
P10809_1018
84.2
P10809_1037
102.4
P10809_1056
68.6
P10809_1075
101.2
P10809_1094
88.1
P10809_1106
113.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 215.2
Samples: 4
Max nTPM: 300.5
Min nTPM: 155.5
RHH5202_R3573
231.0
RHH5230_R3602
155.5
RHH5259_R3631
300.5
RHH5288_R3660
173.8
Effector memory CD8 T-cell nTPM: 229.0
Samples: 4
Max nTPM: 248.0
Min nTPM: 197.5
RHH5203_R3574
248.0
RHH5231_R3603
197.5
RHH5260_R3632
243.6
RHH5289_R3661
226.8
MAIT T-cell nTPM: 183.0
Samples: 4
Max nTPM: 238.3
Min nTPM: 128.4
RHH5233_R3605
177.7
RHH5205_R3576
238.3
RHH5262_R3634
187.7
RHH5297_R3663
128.4
Memory CD4 T-cell TFH nTPM: 190.4
Samples: 4
Max nTPM: 213.9
Min nTPM: 137.6
RHH5300_R3666
137.6
RHH5236_R3608
201.6
RHH5265_R3637
208.3
RHH5208_R3579
213.9
Memory CD4 T-cell Th1 nTPM: 221.2
Samples: 4
Max nTPM: 273.9
Min nTPM: 164.6
RHH5210_R3581
181.7
RHH5302_R3668
164.6
RHH5238_R3610
273.9
RHH5267_R3639
264.4
Memory CD4 T-cell Th1/Th17 nTPM: 245.1
Samples: 4
Max nTPM: 323.0
Min nTPM: 163.9
RHH5303_R3669
163.9
RHH5211_R3582
259.5
RHH5239_R3611
323.0
RHH5268_R3640
233.9
Memory CD4 T-cell Th17 nTPM: 230.4
Samples: 4
Max nTPM: 289.4
Min nTPM: 183.0
RHH5304_R3670
183.0
RHH5212_R3583
195.3
RHH5240_R3612
289.4
RHH5269_R3641
253.8
Memory CD4 T-cell Th2 nTPM: 199.8
Samples: 4
Max nTPM: 240.1
Min nTPM: 154.5
RHH5305_R3671
174.4
RHH5213_R3584
240.1
RHH5241_R3613
154.5
RHH5270_R3642
230.3
Naive CD4 T-cell nTPM: 212.3
Samples: 4
Max nTPM: 266.3
Min nTPM: 175.6
RHH5306_R3672
186.2
RHH5214_R3585
175.6
RHH5242_R3614
220.9
RHH5271_R3643
266.3
Naive CD8 T-cell nTPM: 212.2
Samples: 4
Max nTPM: 234.6
Min nTPM: 182.3
RHH5201_R3572
234.6
RHH5229_R3601
224.4
RHH5258_R3630
182.3
RHH5287_R3659
207.5
Non-Vd2 gdTCR nTPM: 210.8
Samples: 4
Max nTPM: 264.9
Min nTPM: 164.2
RHH5235_R3607
183.3
RHH5264_R3636
230.9
RHH5207_R3578
264.9
RHH5299_R3665
164.2
T-reg nTPM: 216.6
Samples: 4
Max nTPM: 255.7
Min nTPM: 159.7
RHH5301_R3667
159.7
RHH5237_R3609
229.9
RHH5266_R3638
255.7
RHH5209_R3580
221.0
Terminal effector memory CD4 T-cell nTPM: 206.2
Samples: 2
Max nTPM: 212.7
Min nTPM: 199.7
RHH5243_R3615
212.7
RHH5272_R3644
199.7
Terminal effector memory CD8 T-cell nTPM: 220.9
Samples: 4
Max nTPM: 295.4
Min nTPM: 173.7
RHH5232_R3604
211.6
RHH5204_R3575
173.7
RHH5261_R3633
295.4
RHH5296_R3662
202.7
Vd2 gdTCR nTPM: 203.6
Samples: 4
Max nTPM: 315.1
Min nTPM: 118.6
RHH5234_R3606
170.4
RHH5206_R3577
210.3
RHH5263_R3635
315.1
RHH5298_R3664
118.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.