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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.1
nTPM
Monaco:
74.1
nTPM
Schmiedel:
148.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.1
HPA sample
nTPM
gdT-cell nTPM: 70.3
Samples: 6
Max nTPM: 82.2
Min nTPM: 58.3
P10809_1007
58.3
P10809_1022
66.6
P10809_1041
73.0
P10809_1060
82.2
P10809_1077
73.0
P10809_1098
68.5
MAIT T-cell nTPM: 86.8
Samples: 6
Max nTPM: 112.5
Min nTPM: 65.1
P10809_1006
65.1
P10809_1024
98.3
P10809_1043
74.4
P10809_1062
92.4
P10809_1083
77.8
P10809_1097
112.5
Memory CD4 T-cell nTPM: 93.0
Samples: 6
Max nTPM: 126.1
Min nTPM: 79.9
P10809_1014
79.9
P10809_1026
126.1
P10809_1045
81.4
P10809_1064
94.5
P10809_1086
82.3
P10809_1113
93.8
Memory CD8 T-cell nTPM: 82.5
Samples: 5
Max nTPM: 97.4
Min nTPM: 69.0
P10809_1012
72.8
P10809_1027
97.4
P10809_1046
69.0
P10809_1065
85.0
P10809_1111
88.2
Naive CD4 T-cell nTPM: 104.1
Samples: 6
Max nTPM: 126.3
Min nTPM: 87.1
P10809_1015
88.0
P10809_1030
120.5
P10809_1049
101.7
P10809_1068
126.3
P10809_1085
87.1
P10809_1112
100.9
Naive CD8 T-cell nTPM: 89.9
Samples: 6
Max nTPM: 107.8
Min nTPM: 70.5
P10809_1016
96.6
P10809_1031
107.8
P10809_1050
78.4
P10809_1069
97.0
P10809_1087
70.5
P10809_1110
89.1
T-reg nTPM: 97.5
Samples: 6
Max nTPM: 149.9
Min nTPM: 69.5
P10809_1018
69.5
P10809_1037
149.9
P10809_1056
85.5
P10809_1075
89.9
P10809_1094
89.1
P10809_1106
101.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.8
Samples: 4
Max nTPM: 72.9
Min nTPM: 48.6
RHH5202_R3573
56.9
RHH5230_R3602
56.9
RHH5259_R3631
48.6
RHH5288_R3660
72.9
Effector memory CD8 T-cell nTPM: 40.1
Samples: 4
Max nTPM: 51.1
Min nTPM: 35.4
RHH5203_R3574
35.7
RHH5231_R3603
51.1
RHH5260_R3632
38.2
RHH5289_R3661
35.4
MAIT T-cell nTPM: 58.3
Samples: 4
Max nTPM: 74.7
Min nTPM: 41.1
RHH5233_R3605
68.6
RHH5205_R3576
41.1
RHH5262_R3634
48.9
RHH5297_R3663
74.7
Memory CD4 T-cell TFH nTPM: 65.3
Samples: 4
Max nTPM: 82.6
Min nTPM: 54.8
RHH5300_R3666
67.2
RHH5236_R3608
82.6
RHH5265_R3637
56.7
RHH5208_R3579
54.8
Memory CD4 T-cell Th1 nTPM: 56.9
Samples: 4
Max nTPM: 85.5
Min nTPM: 41.7
RHH5210_R3581
50.6
RHH5302_R3668
85.5
RHH5238_R3610
49.9
RHH5267_R3639
41.7
Memory CD4 T-cell Th1/Th17 nTPM: 60.3
Samples: 4
Max nTPM: 89.0
Min nTPM: 34.7
RHH5303_R3669
89.0
RHH5211_R3582
59.0
RHH5239_R3611
34.7
RHH5268_R3640
58.5
Memory CD4 T-cell Th17 nTPM: 49.3
Samples: 4
Max nTPM: 58.1
Min nTPM: 40.2
RHH5304_R3670
58.1
RHH5212_R3583
53.9
RHH5240_R3612
44.9
RHH5269_R3641
40.2
Memory CD4 T-cell Th2 nTPM: 67.7
Samples: 4
Max nTPM: 92.1
Min nTPM: 51.1
RHH5305_R3671
72.5
RHH5213_R3584
51.1
RHH5241_R3613
92.1
RHH5270_R3642
54.9
Naive CD4 T-cell nTPM: 74.1
Samples: 4
Max nTPM: 89.6
Min nTPM: 65.9
RHH5306_R3672
74.0
RHH5214_R3585
89.6
RHH5242_R3614
65.9
RHH5271_R3643
67.0
Naive CD8 T-cell nTPM: 70.2
Samples: 4
Max nTPM: 79.0
Min nTPM: 58.4
RHH5201_R3572
68.9
RHH5229_R3601
58.4
RHH5258_R3630
79.0
RHH5287_R3659
74.5
Non-Vd2 gdTCR nTPM: 45.3
Samples: 4
Max nTPM: 62.7
Min nTPM: 32.0
RHH5235_R3607
32.0
RHH5264_R3636
62.7
RHH5207_R3578
34.8
RHH5299_R3665
51.7
T-reg nTPM: 66.9
Samples: 4
Max nTPM: 78.6
Min nTPM: 55.1
RHH5301_R3667
78.6
RHH5237_R3609
75.9
RHH5266_R3638
55.1
RHH5209_R3580
57.9
Terminal effector memory CD4 T-cell nTPM: 49.4
Samples: 2
Max nTPM: 63.5
Min nTPM: 35.3
RHH5243_R3615
35.3
RHH5272_R3644
63.5
Terminal effector memory CD8 T-cell nTPM: 54.3
Samples: 4
Max nTPM: 65.7
Min nTPM: 46.4
RHH5232_R3604
50.5
RHH5204_R3575
65.7
RHH5261_R3633
46.4
RHH5296_R3662
54.4
Vd2 gdTCR nTPM: 70.5
Samples: 4
Max nTPM: 88.7
Min nTPM: 44.2
RHH5234_R3606
67.2
RHH5206_R3577
81.7
RHH5263_R3635
44.2
RHH5298_R3664
88.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
