HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:15.9 nTPM
GTEx:10.4 nTPM
FANTOM5:17.1 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:22.8 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043253Antibody HPA047809
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
1855 Male, age 76, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.6
2148 Female, age 91, left hemisphere 15.2
1898 Male, age 80, left hemisphere 14.6
1911 Female, age 85, right hemisphere 14.6
2529 Female, age 94, left hemisphere 14.3
Dentate gyrus
nTPM: 14.9
2530 Female, age 94, left hemisphere 17.5
2531 Female, age 67, both hemispheres 15.9
1927 Female, age 91, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.5
2010 Male, age 76, both hemispheres 13.6
2528 Male, age 74, both hemispheres 13.2
Entorhinal gyrus
nTPM: 15.1
2764 Male, age 80, right hemisphere 17.5
2686 Male, age 75, right hemisphere 16.2
1787 Male, age 76, left hemisphere 15.7
2613 Female, age 94, left hemisphere 14.2
1938 Female, age 85, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.4
Hippocampus, CA1
nTPM: 15.1
2527 Male, age 74, both hemispheres 16.4
2749 Male, age 80, left hemisphere 16.3
1873 Female, age 85, both hemispheres 15.5
2082 Female, age 91, right hemisphere 14.1
2045 Male, age 76, both hemispheres 13.3
Hippocampus, CA2
nTPM: 13.7
1892 Male, age 76, both hemispheres 14.8
1963 Male, age 80, left hemisphere 14.4
1940 Female, age 85, left hemisphere 13.9
2249 Male, age 74, both hemispheres 13.6
2113 Female, age 91, right hemisphere 13.5
2437 Female, age 94, left hemisphere 12.3
Hippocampus, CA3
nTPM: 15.0
2620 Female, age 94, left hemisphere 16.6
1867 Male, age 76, both hemispheres 15.6
2436 Male, age 74, both hemispheres 15.6
2137 Male, age 80, left hemisphere 15.2
2861 Female, age 67, both hemispheres 14.8
1891 Female, age 85, both hemispheres 11.8
Parahippocampal cortex
nTPM: 15.0
2532 Female, age 72, left hemisphere 17.8
1850 Male, age 80, both hemispheres 16.7
2622 Female, age 67, right hemisphere 15.9
2245 Female, age 91, both hemispheres 15.4
2250 Female, age 67, right hemisphere 14.8
2018 Male, age 76, both hemispheres 14.6
2693 Female, age 94, both hemispheres 14.5
2692 Male, age 74, both hemispheres 14.4
1933 Female, age 85, both hemispheres 13.2
1990 Female, age 91, right hemisphere 13.0
Perirhinal gyrus
nTPM: 15.9
1841 Female, age 85, right hemisphere 16.8
1794 Male, age 80, right hemisphere 16.3
2521 Female, age 94, right hemisphere 16.3
1847 Female, age 91, left hemisphere 15.7
2848 Male, age 76, right hemisphere 14.6
Subiculum
nTPM: 14.8
2619 Male, age 74, both hemispheres 18.5
2438 Female, age 94, left hemisphere 16.5
1977 Female, age 85, both hemispheres 15.4
1901 Male, age 80, both hemispheres 14.1
2042 Male, age 76, both hemispheres 12.8
2729 Female, age 91, right hemisphere 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 20.0
Min nTPM: 3.7
Std nTPM: 3.0
Median nTPM: 10.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 17.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 17.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 17.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 17.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 16.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 16.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 15.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.1
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 19.2
Sample A Female 27.1
Sample B Female 19.2
Sample C Male 21.9
Sample D Male 19.9
Dorsal hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 31.8
Min nTPM: 20.4
Sample A Female 31.8
Sample B Female 20.8
Sample C Male 27.7
Sample D Male 20.4
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 18.7
Sample A Female 23.4
Sample B Female 23.4
Sample C Male 18.7
Sample D Male 21.1
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 16.0
Sample A Female 30.2
Sample B Female 16.0
Sample C Male 28.1
Sample D Male 23.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.3
Sample A Male 19.3
Sample B Male 24.1
Sample C Female 20.2
Sample D Female 19.6
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.8
Sample A Male 22.8
Sample B Male 22.3
Sample C Female 20.8
Sample D Female 25.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
393212 Antisense, RP_040804_02_D12, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org