HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.6 nTPM
HPA Brain:97.1 nTPM
GTEx:72.6 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:76.1 nTPM
Mouse:43.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.1
Sample id Sample description nTPM
Hippocampus
nTPM: 86.2
1898 Male, age 80, left hemisphere 91.8
2148 Female, age 91, left hemisphere 90.6
1911 Female, age 85, right hemisphere 87.1
2621 Female, age 67, right hemisphere 86.7
2529 Female, age 94, left hemisphere 84.8
1855 Male, age 76, left hemisphere 76.1
Dentate gyrus
nTPM: 88.1
2531 Female, age 67, both hemispheres 98.1
1927 Female, age 91, both hemispheres 97.3
2530 Female, age 94, left hemisphere 92.1
2246 Female, age 85, both hemispheres 83.3
2528 Male, age 74, both hemispheres 81.3
2010 Male, age 76, both hemispheres 76.3
Entorhinal gyrus
nTPM: 84.6
2764 Male, age 80, right hemisphere 94.4
2613 Female, age 94, left hemisphere 92.4
2686 Male, age 75, right hemisphere 92.0
1787 Male, age 76, left hemisphere 79.1
1938 Female, age 85, left hemisphere 78.8
2117 Female, age 91, right hemisphere 70.7
Hippocampus, CA1
nTPM: 90.3
2749 Male, age 80, left hemisphere 134.3
1873 Female, age 85, both hemispheres 84.7
2082 Female, age 91, right hemisphere 80.0
2527 Male, age 74, both hemispheres 78.4
2045 Male, age 76, both hemispheres 74.1
Hippocampus, CA2
nTPM: 83.3
1963 Male, age 80, left hemisphere 97.5
2437 Female, age 94, left hemisphere 90.5
1892 Male, age 76, both hemispheres 81.9
1940 Female, age 85, left hemisphere 78.7
2113 Female, age 91, right hemisphere 76.0
2249 Male, age 74, both hemispheres 75.3
Hippocampus, CA3
nTPM: 97.1
2137 Male, age 80, left hemisphere 123.6
2861 Female, age 67, both hemispheres 112.1
2620 Female, age 94, left hemisphere 102.6
1867 Male, age 76, both hemispheres 88.7
1891 Female, age 85, both hemispheres 82.2
2436 Male, age 74, both hemispheres 73.2
Parahippocampal cortex
nTPM: 79.6
2692 Male, age 74, both hemispheres 90.2
2245 Female, age 91, both hemispheres 84.8
2622 Female, age 67, right hemisphere 83.1
2693 Female, age 94, both hemispheres 82.4
1850 Male, age 80, both hemispheres 81.0
1990 Female, age 91, right hemisphere 79.3
1933 Female, age 85, both hemispheres 78.0
2018 Male, age 76, both hemispheres 75.2
2532 Female, age 72, left hemisphere 74.7
2250 Female, age 67, right hemisphere 67.1
Perirhinal gyrus
nTPM: 77.4
1847 Female, age 91, left hemisphere 84.9
1794 Male, age 80, right hemisphere 84.5
2521 Female, age 94, right hemisphere 79.6
1841 Female, age 85, right hemisphere 72.0
2848 Male, age 76, right hemisphere 65.9
Subiculum
nTPM: 86.2
1901 Male, age 80, both hemispheres 101.3
2042 Male, age 76, both hemispheres 93.5
2438 Female, age 94, left hemisphere 83.4
2619 Male, age 74, both hemispheres 81.1
2729 Female, age 91, right hemisphere 79.8
1977 Female, age 85, both hemispheres 78.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.6
Samples: 197

Max nTPM: 157.4
Min nTPM: 28.1
Std nTPM: 22.8
Median nTPM: 68.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 157.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 146.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 137.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 136.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 124.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 122.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 119.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 119.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 117.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 117.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 116.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10153-102I9 76 years, female 37.0
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.1
Pig sample Sample description nTPM
Subiculum
nTPM: 67.1
Samples: 4

Max nTPM: 78.3
Min nTPM: 61.3
Sample A Female 78.3
Sample B Female 63.4
Sample C Male 65.2
Sample D Male 61.3
Dorsal hippocampus
nTPM: 76.1
Samples: 4

Max nTPM: 89.4
Min nTPM: 65.5
Sample A Female 89.4
Sample B Female 78.6
Sample C Male 65.5
Sample D Male 71.0
Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 77.3
Min nTPM: 60.2
Sample A Female 68.2
Sample B Female 76.3
Sample C Male 77.3
Sample D Male 60.2
Ventral hippocampus
nTPM: 71.0
Samples: 4

Max nTPM: 82.8
Min nTPM: 57.5
Sample A Female 62.5
Sample B Female 57.5
Sample C Male 81.3
Sample D Male 82.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 44.8
Min nTPM: 41.9
Sample A Male 41.9
Sample B Male 44.8
Sample C Female 42.5
Sample D Female 42.9
Hippocampal formation
nTPM: 40.8
Samples: 4

Max nTPM: 43.2
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 41.7
Sample C Female 41.2
Sample D Female 43.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
67815539 Antisense, RP_040920_01_G09, Mouse strain C57BL/6J (56 days, male) 4.4

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