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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
105.5
nTPM
Monaco:
245.5
nTPM
Schmiedel:
30.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.5
HPA sample
nTPM
gdT-cell nTPM: 86.0
Samples: 6
Max nTPM: 109.0
Min nTPM: 67.0
P10809_1007
67.0
P10809_1022
100.9
P10809_1041
74.4
P10809_1060
91.5
P10809_1077
73.2
P10809_1098
109.0
MAIT T-cell nTPM: 91.3
Samples: 6
Max nTPM: 107.3
Min nTPM: 76.0
P10809_1006
85.0
P10809_1024
103.4
P10809_1043
93.6
P10809_1062
107.3
P10809_1083
76.0
P10809_1097
82.2
Memory CD4 T-cell nTPM: 102.0
Samples: 6
Max nTPM: 126.5
Min nTPM: 74.0
P10809_1014
107.3
P10809_1026
126.5
P10809_1045
98.3
P10809_1064
74.0
P10809_1086
80.1
P10809_1113
126.0
Memory CD8 T-cell nTPM: 90.3
Samples: 5
Max nTPM: 96.7
Min nTPM: 67.5
P10809_1012
94.8
P10809_1027
96.5
P10809_1046
96.7
P10809_1065
67.5
P10809_1111
96.0
Naive CD4 T-cell nTPM: 105.5
Samples: 6
Max nTPM: 125.2
Min nTPM: 85.2
P10809_1015
85.2
P10809_1030
114.8
P10809_1049
96.8
P10809_1068
122.8
P10809_1085
87.9
P10809_1112
125.2
Naive CD8 T-cell nTPM: 89.9
Samples: 6
Max nTPM: 109.9
Min nTPM: 68.3
P10809_1016
92.3
P10809_1031
109.9
P10809_1050
85.1
P10809_1069
78.7
P10809_1087
68.3
P10809_1110
105.1
T-reg nTPM: 100.4
Samples: 6
Max nTPM: 119.0
Min nTPM: 76.2
P10809_1018
117.9
P10809_1037
103.3
P10809_1056
76.2
P10809_1075
85.7
P10809_1094
119.0
P10809_1106
100.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 192.0
Samples: 4
Max nTPM: 207.0
Min nTPM: 153.1
RHH5202_R3573
206.4
RHH5230_R3602
207.0
RHH5259_R3631
153.1
RHH5288_R3660
201.4
Effector memory CD8 T-cell nTPM: 171.5
Samples: 4
Max nTPM: 203.5
Min nTPM: 144.3
RHH5203_R3574
148.3
RHH5231_R3603
144.3
RHH5260_R3632
189.8
RHH5289_R3661
203.5
MAIT T-cell nTPM: 186.9
Samples: 4
Max nTPM: 202.9
Min nTPM: 164.4
RHH5233_R3605
164.4
RHH5205_R3576
191.4
RHH5262_R3634
188.7
RHH5297_R3663
202.9
Memory CD4 T-cell TFH nTPM: 230.1
Samples: 4
Max nTPM: 257.7
Min nTPM: 172.8
RHH5300_R3666
257.4
RHH5236_R3608
257.7
RHH5265_R3637
232.3
RHH5208_R3579
172.8
Memory CD4 T-cell Th1 nTPM: 202.6
Samples: 4
Max nTPM: 233.7
Min nTPM: 166.9
RHH5210_R3581
189.2
RHH5302_R3668
220.7
RHH5238_R3610
166.9
RHH5267_R3639
233.7
Memory CD4 T-cell Th1/Th17 nTPM: 209.1
Samples: 4
Max nTPM: 232.5
Min nTPM: 180.0
RHH5303_R3669
232.5
RHH5211_R3582
226.7
RHH5239_R3611
180.0
RHH5268_R3640
197.1
Memory CD4 T-cell Th17 nTPM: 245.5
Samples: 4
Max nTPM: 297.8
Min nTPM: 213.3
RHH5304_R3670
297.8
RHH5212_R3583
213.3
RHH5240_R3612
244.8
RHH5269_R3641
226.0
Memory CD4 T-cell Th2 nTPM: 239.2
Samples: 4
Max nTPM: 255.9
Min nTPM: 230.1
RHH5305_R3671
255.9
RHH5213_R3584
237.7
RHH5241_R3613
230.1
RHH5270_R3642
233.1
Naive CD4 T-cell nTPM: 203.3
Samples: 4
Max nTPM: 245.6
Min nTPM: 171.7
RHH5306_R3672
245.6
RHH5214_R3585
203.9
RHH5242_R3614
171.7
RHH5271_R3643
192.0
Naive CD8 T-cell nTPM: 182.7
Samples: 4
Max nTPM: 237.0
Min nTPM: 120.5
RHH5201_R3572
120.5
RHH5229_R3601
156.4
RHH5258_R3630
217.0
RHH5287_R3659
237.0
Non-Vd2 gdTCR nTPM: 141.6
Samples: 4
Max nTPM: 157.7
Min nTPM: 131.0
RHH5235_R3607
141.8
RHH5264_R3636
135.7
RHH5207_R3578
157.7
RHH5299_R3665
131.0
T-reg nTPM: 217.3
Samples: 4
Max nTPM: 235.9
Min nTPM: 200.9
RHH5301_R3667
220.4
RHH5237_R3609
235.9
RHH5266_R3638
211.9
RHH5209_R3580
200.9
Terminal effector memory CD4 T-cell nTPM: 173.9
Samples: 2
Max nTPM: 175.2
Min nTPM: 172.5
RHH5243_R3615
175.2
RHH5272_R3644
172.5
Terminal effector memory CD8 T-cell nTPM: 175.6
Samples: 4
Max nTPM: 191.2
Min nTPM: 145.4
RHH5232_R3604
176.1
RHH5204_R3575
145.4
RHH5261_R3633
189.6
RHH5296_R3662
191.2
Vd2 gdTCR nTPM: 166.1
Samples: 4
Max nTPM: 205.9
Min nTPM: 141.5
RHH5234_R3606
141.5
RHH5206_R3577
156.0
RHH5263_R3635
205.9
RHH5298_R3664
161.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
