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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
142.3
nTPM
Monaco:
124.4
nTPM
Schmiedel:
95.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.3
HPA sample
nTPM
gdT-cell nTPM: 91.8
Samples: 6
Max nTPM: 110.4
Min nTPM: 58.7
P10809_1007
58.7
P10809_1022
98.3
P10809_1041
82.3
P10809_1060
110.4
P10809_1077
103.4
P10809_1098
97.9
MAIT T-cell nTPM: 99.4
Samples: 6
Max nTPM: 134.4
Min nTPM: 56.0
P10809_1006
56.0
P10809_1024
112.0
P10809_1043
120.3
P10809_1062
104.2
P10809_1083
69.6
P10809_1097
134.4
Memory CD4 T-cell nTPM: 116.1
Samples: 6
Max nTPM: 137.7
Min nTPM: 74.1
P10809_1014
74.1
P10809_1026
137.7
P10809_1045
133.3
P10809_1064
115.0
P10809_1086
109.0
P10809_1113
127.2
Memory CD8 T-cell nTPM: 106.5
Samples: 5
Max nTPM: 137.7
Min nTPM: 67.9
P10809_1012
67.9
P10809_1027
106.0
P10809_1046
122.8
P10809_1065
98.1
P10809_1111
137.7
Naive CD4 T-cell nTPM: 142.3
Samples: 6
Max nTPM: 218.5
Min nTPM: 68.9
P10809_1015
68.9
P10809_1030
153.8
P10809_1049
218.5
P10809_1068
150.6
P10809_1085
109.7
P10809_1112
152.3
Naive CD8 T-cell nTPM: 115.7
Samples: 6
Max nTPM: 135.9
Min nTPM: 78.7
P10809_1016
78.7
P10809_1031
131.1
P10809_1050
135.9
P10809_1069
124.1
P10809_1087
92.9
P10809_1110
131.3
T-reg nTPM: 118.6
Samples: 6
Max nTPM: 186.3
Min nTPM: 69.4
P10809_1018
69.4
P10809_1037
83.3
P10809_1056
186.3
P10809_1075
133.3
P10809_1094
110.1
P10809_1106
129.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 91.8
Min nTPM: 59.9
RHH5202_R3573
91.2
RHH5230_R3602
64.2
RHH5259_R3631
59.9
RHH5288_R3660
91.8
Effector memory CD8 T-cell nTPM: 74.7
Samples: 4
Max nTPM: 104.0
Min nTPM: 56.4
RHH5203_R3574
78.2
RHH5231_R3603
104.0
RHH5260_R3632
60.2
RHH5289_R3661
56.4
MAIT T-cell nTPM: 76.8
Samples: 4
Max nTPM: 117.4
Min nTPM: 61.0
RHH5233_R3605
66.9
RHH5205_R3576
61.0
RHH5262_R3634
61.8
RHH5297_R3663
117.4
Memory CD4 T-cell TFH nTPM: 107.7
Samples: 4
Max nTPM: 159.2
Min nTPM: 76.9
RHH5300_R3666
98.0
RHH5236_R3608
159.2
RHH5265_R3637
76.9
RHH5208_R3579
96.7
Memory CD4 T-cell Th1 nTPM: 87.0
Samples: 4
Max nTPM: 135.2
Min nTPM: 58.7
RHH5210_R3581
91.3
RHH5302_R3668
135.2
RHH5238_R3610
62.9
RHH5267_R3639
58.7
Memory CD4 T-cell Th1/Th17 nTPM: 86.2
Samples: 4
Max nTPM: 122.6
Min nTPM: 64.8
RHH5303_R3669
122.6
RHH5211_R3582
91.8
RHH5239_R3611
65.4
RHH5268_R3640
64.8
Memory CD4 T-cell Th17 nTPM: 72.4
Samples: 4
Max nTPM: 108.0
Min nTPM: 53.4
RHH5304_R3670
71.4
RHH5212_R3583
108.0
RHH5240_R3612
56.7
RHH5269_R3641
53.4
Memory CD4 T-cell Th2 nTPM: 88.8
Samples: 4
Max nTPM: 125.7
Min nTPM: 56.5
RHH5305_R3671
125.7
RHH5213_R3584
79.6
RHH5241_R3613
93.4
RHH5270_R3642
56.5
Naive CD4 T-cell nTPM: 99.7
Samples: 4
Max nTPM: 151.6
Min nTPM: 59.9
RHH5306_R3672
104.3
RHH5214_R3585
151.6
RHH5242_R3614
83.0
RHH5271_R3643
59.9
Naive CD8 T-cell nTPM: 78.8
Samples: 4
Max nTPM: 110.3
Min nTPM: 46.4
RHH5201_R3572
98.3
RHH5229_R3601
46.4
RHH5258_R3630
110.3
RHH5287_R3659
60.1
Non-Vd2 gdTCR nTPM: 110.5
Samples: 4
Max nTPM: 134.3
Min nTPM: 72.6
RHH5235_R3607
72.6
RHH5264_R3636
129.8
RHH5207_R3578
105.4
RHH5299_R3665
134.3
T-reg nTPM: 89.1
Samples: 4
Max nTPM: 120.2
Min nTPM: 63.3
RHH5301_R3667
120.2
RHH5237_R3609
102.0
RHH5266_R3638
63.3
RHH5209_R3580
70.7
Terminal effector memory CD4 T-cell nTPM: 74.2
Samples: 2
Max nTPM: 87.7
Min nTPM: 60.7
RHH5243_R3615
60.7
RHH5272_R3644
87.7
Terminal effector memory CD8 T-cell nTPM: 124.4
Samples: 4
Max nTPM: 211.9
Min nTPM: 85.3
RHH5232_R3604
105.4
RHH5204_R3575
211.9
RHH5261_R3633
85.3
RHH5296_R3662
95.0
Vd2 gdTCR nTPM: 121.6
Samples: 4
Max nTPM: 186.7
Min nTPM: 58.2
RHH5234_R3606
95.2
RHH5206_R3577
186.7
RHH5263_R3635
58.2
RHH5298_R3664
146.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
