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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
57.8
nTPM
HPA Brain:
12.4
nTPM
GTEx:
57.8
nTPM
FANTOM5:
48.7
Scaled Tags Per Million
Pig:
9.9
nTPM
Mouse:
42.4
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
12.4
Sample id
Sample description
nTPM
Amygdala nTPM: 12.4
2514
Male, age 75, right hemisphere
17.6
2517
Female, age 94, left hemisphere
15.8
2814
Male, age 76, right hemisphere
14.0
1987
Female, age 91, left hemisphere
8.3
2695
Female, age 67, right hemisphere
6.5
Basal amygdala nTPM: 8.2
1955
Male, age 76, both hemispheres
10.1
2110
Male, age 80, left hemisphere
9.5
2609
Male, age 75, right hemisphere
9.2
2685
Female, age 94, left hemisphere
8.8
2243
Female, age 91, right hemisphere
7.6
2827
Female, age 67, right hemisphere
4.2
Central amygdala nTPM: 10.4
2515
Male, age 75, right hemisphere
14.7
1905
Male, age 76, both hemispheres
12.5
2239
Male, age 80, left hemisphere
11.0
2826
Female, age 94, left hemisphere
8.3
2701
Female, age 91, right hemisphere
5.3
Corticomedial amygdala nTPM: 11.2
2829
Male, age 80, left hemisphere
17.9
2428
Male, age 75, right hemisphere
12.7
2240
Male, age 76, both hemispheres
11.9
2242
Female, age 91, right hemisphere
10.5
2429
Female, age 94, left hemisphere
10.2
2535
Female, age 67, right hemisphere
4.2
Lateral amygdala nTPM: 9.0
1883
Male, age 76, both hemispheres
14.1
2516
Male, age 75, right hemisphere
12.9
2534
Female, age 94, left hemisphere
8.7
2255
Female, age 91, right hemisphere
7.6
2830
Female, age 67, right hemisphere
6.0
2256
Male, age 80, left hemisphere
4.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
57.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 57.8
Samples: 152
Max nTPM: 202.6
Min nTPM: 23.9
Std nTPM: 22.2
Median nTPM: 53.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
202.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
144.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
140.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
112.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
111.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
108.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
101.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
100.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
96.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
91.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
86.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
85.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
84.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
82.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
81.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
80.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
79.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
78.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
78.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
77.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
74.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
74.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
71.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
70.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
69.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
68.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
67.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
67.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
66.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
66.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
66.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
66.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
65.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
65.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
65.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
64.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
63.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
63.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
62.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
62.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
62.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
62.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
60.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
60.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
59.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
59.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
59.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
58.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
58.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
57.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
57.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
57.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
57.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
57.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
56.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
55.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
55.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
54.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
54.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
54.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
54.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
54.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
54.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
54.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
53.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
53.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
53.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
53.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
53.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
52.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
52.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
52.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
52.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
52.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
51.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
51.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
51.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
51.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
51.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
50.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
50.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
50.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
50.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
50.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
48.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
48.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
48.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
47.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
47.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
46.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
46.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
46.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
46.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
45.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
45.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
45.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
45.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
43.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
42.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
42.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
42.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
41.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
41.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
41.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
41.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
40.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
39.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
39.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
38.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
37.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
37.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
37.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
36.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
35.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
34.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
34.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
26.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
23.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.