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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.0
nTPM
Monaco:
113.0
nTPM
Schmiedel:
213.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.0
HPA sample
nTPM
gdT-cell nTPM: 52.4
Samples: 6
Max nTPM: 68.9
Min nTPM: 35.4
P10809_1007
35.4
P10809_1022
47.9
P10809_1041
68.9
P10809_1060
52.9
P10809_1077
56.9
P10809_1098
52.1
MAIT T-cell nTPM: 80.9
Samples: 6
Max nTPM: 104.7
Min nTPM: 53.8
P10809_1006
53.8
P10809_1024
86.4
P10809_1043
75.2
P10809_1062
60.4
P10809_1083
104.7
P10809_1097
104.7
Memory CD4 T-cell nTPM: 78.9
Samples: 6
Max nTPM: 92.3
Min nTPM: 62.9
P10809_1014
67.5
P10809_1026
62.9
P10809_1045
84.6
P10809_1064
79.0
P10809_1086
92.3
P10809_1113
87.1
Memory CD8 T-cell nTPM: 63.2
Samples: 5
Max nTPM: 76.5
Min nTPM: 50.9
P10809_1012
50.9
P10809_1027
64.0
P10809_1046
58.3
P10809_1065
66.4
P10809_1111
76.5
Naive CD4 T-cell nTPM: 88.6
Samples: 6
Max nTPM: 103.3
Min nTPM: 65.4
P10809_1015
65.4
P10809_1030
89.6
P10809_1049
103.3
P10809_1068
90.4
P10809_1085
90.8
P10809_1112
92.3
Naive CD8 T-cell nTPM: 72.7
Samples: 6
Max nTPM: 84.4
Min nTPM: 57.5
P10809_1016
57.5
P10809_1031
84.4
P10809_1050
70.4
P10809_1069
64.7
P10809_1087
76.3
P10809_1110
82.9
T-reg nTPM: 95.0
Samples: 6
Max nTPM: 117.8
Min nTPM: 61.5
P10809_1018
61.5
P10809_1037
81.6
P10809_1056
99.7
P10809_1075
103.1
P10809_1094
106.4
P10809_1106
117.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.2
Samples: 4
Max nTPM: 125.8
Min nTPM: 47.1
RHH5202_R3573
111.8
RHH5230_R3602
47.1
RHH5259_R3631
56.1
RHH5288_R3660
125.8
Effector memory CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 120.8
Min nTPM: 40.2
RHH5203_R3574
120.8
RHH5231_R3603
89.9
RHH5260_R3632
40.2
RHH5289_R3661
92.9
MAIT T-cell nTPM: 80.6
Samples: 4
Max nTPM: 102.4
Min nTPM: 56.5
RHH5233_R3605
86.2
RHH5205_R3576
56.5
RHH5262_R3634
77.3
RHH5297_R3663
102.4
Memory CD4 T-cell TFH nTPM: 111.4
Samples: 4
Max nTPM: 155.0
Min nTPM: 84.7
RHH5300_R3666
107.6
RHH5236_R3608
98.3
RHH5265_R3637
84.7
RHH5208_R3579
155.0
Memory CD4 T-cell Th1 nTPM: 97.8
Samples: 4
Max nTPM: 149.0
Min nTPM: 54.8
RHH5210_R3581
117.8
RHH5302_R3668
149.0
RHH5238_R3610
54.8
RHH5267_R3639
69.5
Memory CD4 T-cell Th1/Th17 nTPM: 91.4
Samples: 4
Max nTPM: 137.7
Min nTPM: 47.9
RHH5303_R3669
117.4
RHH5211_R3582
137.7
RHH5239_R3611
47.9
RHH5268_R3640
62.6
Memory CD4 T-cell Th17 nTPM: 79.8
Samples: 4
Max nTPM: 119.7
Min nTPM: 51.1
RHH5304_R3670
79.4
RHH5212_R3583
119.7
RHH5240_R3612
68.9
RHH5269_R3641
51.1
Memory CD4 T-cell Th2 nTPM: 112.0
Samples: 4
Max nTPM: 138.6
Min nTPM: 81.3
RHH5305_R3671
104.8
RHH5213_R3584
123.1
RHH5241_R3613
138.6
RHH5270_R3642
81.3
Naive CD4 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 158.5
Min nTPM: 59.2
RHH5306_R3672
103.3
RHH5214_R3585
158.5
RHH5242_R3614
110.3
RHH5271_R3643
59.2
Naive CD8 T-cell nTPM: 97.1
Samples: 4
Max nTPM: 119.8
Min nTPM: 40.0
RHH5201_R3572
119.8
RHH5229_R3601
40.0
RHH5258_R3630
115.2
RHH5287_R3659
113.3
Non-Vd2 gdTCR nTPM: 77.2
Samples: 4
Max nTPM: 93.1
Min nTPM: 52.5
RHH5235_R3607
52.5
RHH5264_R3636
93.1
RHH5207_R3578
77.4
RHH5299_R3665
85.6
T-reg nTPM: 113.0
Samples: 4
Max nTPM: 146.5
Min nTPM: 75.3
RHH5301_R3667
146.5
RHH5237_R3609
127.2
RHH5266_R3638
75.3
RHH5209_R3580
103.0
Terminal effector memory CD4 T-cell nTPM: 75.1
Samples: 2
Max nTPM: 89.5
Min nTPM: 60.7
RHH5243_R3615
60.7
RHH5272_R3644
89.5
Terminal effector memory CD8 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 88.4
Min nTPM: 54.6
RHH5232_R3604
88.4
RHH5204_R3575
80.1
RHH5261_R3633
54.6
RHH5296_R3662
87.2
Vd2 gdTCR nTPM: 88.9
Samples: 4
Max nTPM: 109.7
Min nTPM: 56.3
RHH5234_R3606
100.1
RHH5206_R3577
89.6
RHH5263_R3635
56.3
RHH5298_R3664
109.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
