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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.2
nTPM
Monaco:
183.9
nTPM
Schmiedel:
73.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.2
HPA sample
nTPM
gdT-cell nTPM: 0.5
Samples: 6
Max nTPM: 1.3
Min nTPM: 0.1
P10809_1007
0.1
P10809_1022
0.7
P10809_1041
1.3
P10809_1060
0.3
P10809_1077
0.3
P10809_1098
0.4
MAIT T-cell nTPM: 1.2
Samples: 6
Max nTPM: 3.9
Min nTPM: 0.0
P10809_1006
1.4
P10809_1024
0.0
P10809_1043
0.9
P10809_1062
0.9
P10809_1083
3.9
P10809_1097
0.0
Memory CD4 T-cell nTPM: 29.3
Samples: 6
Max nTPM: 58.4
Min nTPM: 16.7
P10809_1014
58.4
P10809_1026
24.2
P10809_1045
38.1
P10809_1064
16.7
P10809_1086
17.3
P10809_1113
21.0
Memory CD8 T-cell nTPM: 14.9
Samples: 5
Max nTPM: 29.9
Min nTPM: 2.6
P10809_1012
27.8
P10809_1027
29.9
P10809_1046
8.2
P10809_1065
6.0
P10809_1111
2.6
Naive CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 68.4
Min nTPM: 17.1
P10809_1015
68.4
P10809_1030
24.9
P10809_1049
26.5
P10809_1068
30.5
P10809_1085
17.1
P10809_1112
28.6
Naive CD8 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 44.4
Min nTPM: 8.7
P10809_1016
24.0
P10809_1031
33.6
P10809_1050
18.6
P10809_1069
8.7
P10809_1087
44.4
P10809_1110
14.6
T-reg nTPM: 46.2
Samples: 6
Max nTPM: 68.3
Min nTPM: 33.2
P10809_1018
65.7
P10809_1037
37.4
P10809_1056
38.3
P10809_1075
34.2
P10809_1094
68.3
P10809_1106
33.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
183.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.9
Samples: 4
Max nTPM: 69.8
Min nTPM: 23.3
RHH5202_R3573
42.1
RHH5230_R3602
23.3
RHH5259_R3631
32.2
RHH5288_R3660
69.8
Effector memory CD8 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 37.7
Min nTPM: 18.9
RHH5203_R3574
18.9
RHH5231_R3603
37.7
RHH5260_R3632
22.5
RHH5289_R3661
21.3
MAIT T-cell nTPM: 3.2
Samples: 4
Max nTPM: 4.5
Min nTPM: 0.6
RHH5233_R3605
3.4
RHH5205_R3576
4.5
RHH5262_R3634
0.6
RHH5297_R3663
4.4
Memory CD4 T-cell TFH nTPM: 183.9
Samples: 4
Max nTPM: 233.9
Min nTPM: 102.0
RHH5300_R3666
207.2
RHH5236_R3608
233.9
RHH5265_R3637
102.0
RHH5208_R3579
192.6
Memory CD4 T-cell Th1 nTPM: 107.5
Samples: 4
Max nTPM: 178.6
Min nTPM: 58.1
RHH5210_R3581
127.2
RHH5302_R3668
178.6
RHH5238_R3610
58.1
RHH5267_R3639
65.9
Memory CD4 T-cell Th1/Th17 nTPM: 109.5
Samples: 4
Max nTPM: 188.8
Min nTPM: 39.6
RHH5303_R3669
188.8
RHH5211_R3582
154.7
RHH5239_R3611
55.0
RHH5268_R3640
39.6
Memory CD4 T-cell Th17 nTPM: 74.7
Samples: 4
Max nTPM: 102.2
Min nTPM: 54.6
RHH5304_R3670
86.8
RHH5212_R3583
102.2
RHH5240_R3612
55.3
RHH5269_R3641
54.6
Memory CD4 T-cell Th2 nTPM: 110.9
Samples: 4
Max nTPM: 176.1
Min nTPM: 61.7
RHH5305_R3671
176.1
RHH5213_R3584
87.3
RHH5241_R3613
118.5
RHH5270_R3642
61.7
Naive CD4 T-cell nTPM: 114.4
Samples: 4
Max nTPM: 146.1
Min nTPM: 90.6
RHH5306_R3672
123.2
RHH5214_R3585
146.1
RHH5242_R3614
97.7
RHH5271_R3643
90.6
Naive CD8 T-cell nTPM: 43.8
Samples: 4
Max nTPM: 62.6
Min nTPM: 26.2
RHH5201_R3572
62.6
RHH5229_R3601
26.2
RHH5258_R3630
49.2
RHH5287_R3659
37.3
Non-Vd2 gdTCR nTPM: 1.1
Samples: 4
Max nTPM: 3.3
Min nTPM: 0.0
RHH5235_R3607
0.3
RHH5264_R3636
0.6
RHH5207_R3578
0.0
RHH5299_R3665
3.3
T-reg nTPM: 110.6
Samples: 4
Max nTPM: 150.9
Min nTPM: 61.4
RHH5301_R3667
148.2
RHH5237_R3609
150.9
RHH5266_R3638
61.4
RHH5209_R3580
81.8
Terminal effector memory CD4 T-cell nTPM: 17.6
Samples: 2
Max nTPM: 33.7
Min nTPM: 1.4
RHH5243_R3615
1.4
RHH5272_R3644
33.7
Terminal effector memory CD8 T-cell nTPM: 18.9
Samples: 4
Max nTPM: 31.4
Min nTPM: 2.9
RHH5232_R3604
13.0
RHH5204_R3575
2.9
RHH5261_R3633
28.4
RHH5296_R3662
31.4
Vd2 gdTCR nTPM: 3.3
Samples: 4
Max nTPM: 7.3
Min nTPM: 0.0
RHH5234_R3606
3.0
RHH5206_R3577
0.0
RHH5263_R3635
7.3
RHH5298_R3664
2.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
