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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
44.1
nTPM
HPA Brain:
28.5
nTPM
GTEx:
44.1
nTPM
FANTOM5:
80.1
Scaled Tags Per Million
Pig:
33.2
nTPM
Mouse:
32.0
nTPM
Allen mouse:
4.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
28.5
Sample id
Sample description
nTPM
Amygdala nTPM: 19.4
2695
Female, age 67, right hemisphere
31.6
2814
Male, age 76, right hemisphere
21.8
2517
Female, age 94, left hemisphere
17.6
2514
Male, age 75, right hemisphere
14.9
1987
Female, age 91, left hemisphere
11.4
Basal amygdala nTPM: 28.0
2827
Female, age 67, right hemisphere
49.6
2685
Female, age 94, left hemisphere
35.7
2609
Male, age 75, right hemisphere
27.8
2243
Female, age 91, right hemisphere
20.6
1955
Male, age 76, both hemispheres
19.6
2110
Male, age 80, left hemisphere
14.7
Central amygdala nTPM: 27.6
2826
Female, age 94, left hemisphere
46.0
2701
Female, age 91, right hemisphere
29.3
2239
Male, age 80, left hemisphere
23.5
1905
Male, age 76, both hemispheres
22.2
2515
Male, age 75, right hemisphere
17.1
Corticomedial amygdala nTPM: 25.1
2535
Female, age 67, right hemisphere
56.2
2829
Male, age 80, left hemisphere
24.5
2429
Female, age 94, left hemisphere
18.4
2242
Female, age 91, right hemisphere
18.2
2240
Male, age 76, both hemispheres
16.9
2428
Male, age 75, right hemisphere
16.4
Lateral amygdala nTPM: 28.5
2534
Female, age 94, left hemisphere
33.9
2256
Male, age 80, left hemisphere
33.8
2830
Female, age 67, right hemisphere
33.5
2255
Female, age 91, right hemisphere
31.3
2516
Male, age 75, right hemisphere
20.1
1883
Male, age 76, both hemispheres
18.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
44.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 44.1
Samples: 152
Max nTPM: 71.7
Min nTPM: 16.2
Std nTPM: 10.2
Median nTPM: 44.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
71.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
67.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
66.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
62.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
62.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
61.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
61.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
61.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
61.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
61.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
59.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
59.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
57.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
57.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
56.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
56.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
55.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
55.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
55.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
55.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
55.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
55.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
53.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
53.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
52.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
52.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
52.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
52.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
51.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
51.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
51.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
51.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
50.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
50.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
50.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
49.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
49.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
49.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
48.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
48.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
47.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
47.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
47.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
47.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
47.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
47.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
47.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
47.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
47.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
46.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
46.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
46.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
46.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
45.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
45.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
45.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
44.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
44.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
44.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
44.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
44.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
43.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
43.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
43.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
43.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
43.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
42.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
42.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
42.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
41.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
41.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
41.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
40.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
40.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
40.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
39.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
39.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
39.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
39.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
39.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
38.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
38.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
38.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
38.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
38.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
38.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
37.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
37.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
37.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
37.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
36.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
36.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
36.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
36.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
36.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
35.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
35.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
35.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
35.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
35.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
35.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
34.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
34.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
34.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
34.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
33.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
33.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
33.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
32.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
31.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
31.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
29.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
29.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
26.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
25.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
23.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
22.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
21.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
32.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 32.1
Samples: 4
Max nTPM: 39.0
Min nTPM: 27.2
Sample A
Male
27.2
Sample B
Male
32.8
Sample C
Female
39.0
Sample D
Female
29.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.