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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
56.9
nTPM
FANTOM5:
53.1
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
56.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 56.9
1984
Male, age 76, both hemispheres
122.6
2090
Male, age 80, both hemispheres
37.6
2188
Female, age 91, both hemispheres
34.2
2301
Female, age 85, both hemispheres
33.4
Dorsal cochlear nucleus nTPM: 39.6
2802
Male, age 74, right hemisphere
48.6
2187
Female, age 91, both hemispheres
45.9
2058
Male, age 76, both hemispheres
39.2
2378
Male, age 80, both hemispheres
35.0
2370
Male, age 61, both hemispheres
29.4
Dorsal tegmental nucleus nTPM: 43.2
2326
Male, age 74, both hemispheres
54.4
2358
Male, age 61, both hemispheres
46.1
2083
Male, age 80, both hemispheres
37.1
1936
Male, age 76, left hemisphere
35.2
Dorsolateral tegmental area nTPM: 44.3
2360
Male, age 74, both hemispheres
68.5
2141
Male, age 76, both hemispheres
50.2
2654
Male, age 80, both hemispheres
38.2
2337
Male, age 61, both hemispheres
36.0
2751
Female, age 85, both hemispheres
28.5
Kolliker-Fuse nucleus nTPM: 30.3
2315
Male, age 76, right hemisphere
33.7
2163
Male, age 80, both hemispheres
29.9
2793
Female, age 91, left hemisphere
27.4
Lateral lemniscal nuclei nTPM: 31.7
2169
Male, age 76, both hemispheres
39.4
2746
Female, age 85, left hemisphere
35.5
2453
Male, age 74, right hemisphere
28.6
2036
Male, age 80, both hemispheres
27.9
2320
Female, age 91, left hemisphere
27.1
Lateral parabrachial nucleus nTPM: 30.7
2139
Female, age 85, right hemisphere
35.6
2013
Male, age 80, both hemispheres
34.3
2792
Male, age 76, both hemispheres
29.1
2790
Male, age 61, both hemispheres
23.7
Lateral vestibular nucleus nTPM: 36.0
2311
Male, age 80, both hemispheres
44.4
2184
Male, age 76, both hemispheres
27.6
Locus coeruleus nTPM: 49.2
2014
Male, age 55, unknown
59.7
2720
Male, age 74, both hemispheres
50.8
2162
Male, age 80, both hemispheres
49.6
2788
Male, age 74, unknown
48.4
2123
Female, age 91, both hemispheres
48.3
2317
Female, age 72, unknown
46.7
1980
Male, age 76, both hemispheres
40.8
Medial parabrachial nucleus nTPM: 37.4
2170
Female, age 91, both hemispheres
49.9
2854
Male, age 80, both hemispheres
44.7
2463
Female, age 85, right hemisphere
42.0
2786
Male, age 76, both hemispheres
28.9
2156
Male, age 61, both hemispheres
21.5
Medial periolivary nuclei nTPM: 31.6
2171
Female, age 85, both hemispheres
40.4
2063
Male, age 76, both hemispheres
37.5
2791
Male, age 74, right hemisphere
32.6
2458
Female, age 91, both hemispheres
25.6
2081
Male, age 80, both hemispheres
21.8
Motor facial nucleus nTPM: 29.2
2062
Male, age 76, both hemispheres
38.6
2365
Male, age 74, right hemisphere
37.2
2795
Female, age 91, both hemispheres
31.1
2126
Male, age 61, both hemispheres
25.1
2697
Female, age 85, both hemispheres
25.0
2327
Male, age 80, both hemispheres
18.0
Motor trigeminal nucleus nTPM: 29.1
2335
Male, age 61, both hemispheres
32.6
2321
Female, age 91, both hemispheres
32.2
2560
Male, age 74, both hemispheres
27.4
2079
Male, age 80, both hemispheres
27.1
2309
Male, age 76, both hemispheres
26.2
Nuclei of the trapezoid body nTPM: 36.7
1983
Male, age 76, both hemispheres
54.5
2735
Female, age 85, both hemispheres
39.3
2159
Male, age 61, both hemispheres
31.9
2368
Female, age 91, both hemispheres
29.0
2166
Male, age 80, both hemispheres
28.6
Nucleus raphe magnus nTPM: 33.2
2455
Male, age 74, both hemispheres
38.6
2051
Male, age 76, both hemispheres
37.7
2172
Female, age 85, both hemispheres
37.7
2160
Male, age 61, both hemispheres
32.7
2328
Male, age 80, both hemispheres
27.2
2459
Female, age 91, both hemispheres
25.2
Paramedian reticular nucleus nTPM: 31.1
2050
Female, age 85, both hemispheres
34.5
2057
Male, age 80, both hemispheres
33.2
2313
Male, age 61, both hemispheres
29.7
2052
Male, age 76, both hemispheres
26.8
Pedunculopontine tegmental nucleus nTPM: 44.2
1921
Female, age 85, both hemispheres
49.5
2334
Male, age 80, both hemispheres
46.2
2338
Male, age 61, both hemispheres
36.9
Pontine nuclei nTPM: 33.9
1968
Male, age 76, left hemisphere
46.9
2787
Female, age 85, both hemispheres
42.2
2454
Male, age 74, left hemisphere
33.8
1863
Male, age 55, unknown
32.5
2109
Female, age 72, unknown
31.2
2727
Male, age 61, right hemisphere
30.0
2319
Female, age 91, both hemispheres
29.4
2115
Male, age 80, left hemisphere
24.8
Pontine raphe nucleus nTPM: 39.0
2853
Male, age 76, midline
39.1
2122
Female, age 85, midline
39.0
Posteroventral cochlear nucleus nTPM: 30.1
2752
Female, age 85, both hemispheres
45.3
2070
Male, age 76, both hemispheres
30.6
2371
Male, age 61, both hemispheres
30.0
2341
Male, age 80, both hemispheres
25.4
2135
Female, age 91, both hemispheres
19.3
Principal sensory trigeminal nucleus nTPM: 26.9
2324
Male, age 76, both hemispheres
29.1
2008
Male, age 80, left hemisphere
28.6
2158
Male, age 61, both hemispheres
27.5
2367
Female, age 91, left hemisphere
22.3
Reticular pontine nucleus, caudal nTPM: 29.9
2559
Male, age 74, both hemispheres
37.3
2092
Male, age 76, both hemispheres
35.9
2332
Male, age 80, right hemisphere
24.4
2457
Female, age 91, both hemispheres
21.9
Reticular pontine nucleus, oral nTPM: 34.6
2167
Male, age 76, both hemispheres
40.6
2361
Male, age 74, both hemispheres
38.2
2012
Female, age 85, both hemispheres
34.1
1939
Male, age 80, both hemispheres
30.5
2366
Female, age 91, both hemispheres
29.8
Reticulotegmental nucleus nTPM: 35.0
2452
Male, age 74, both hemispheres
42.0
2325
Male, age 76, both hemispheres
33.7
2322
Female, age 91, both hemispheres
32.9
2333
Male, age 80, both hemispheres
31.4
Spinal trigeminal nucleus, oral nTPM: 44.8
1978
Male, age 76, both hemispheres
59.6
2737
Female, age 85, both hemispheres
41.4
2164
Male, age 80, both hemispheres
33.3
Subcoeruleus area nTPM: 39.3
2451
Male, age 74, both hemispheres
59.8
2323
Female, age 91, left hemisphere
51.9
1958
Male, age 80, both hemispheres
33.1
2089
Male, age 76, left hemisphere
28.1
2369
Female, age 85, left hemisphere
23.8
Superior olive nTPM: 30.6
2364
Male, age 74, right hemisphere
39.9
1875
Female, age 85, both hemispheres
36.7
2020
Male, age 76, both hemispheres
30.5
2561
Female, age 91, both hemispheres
25.2
2329
Male, age 80, right hemisphere
20.8
Ventral periolivary nuclei nTPM: 29.7
2130
Female, age 85, both hemispheres
36.3
2165
Male, age 80, both hemispheres
33.5
2023
Male, age 76, both hemispheres
26.3
2794
Female, age 91, left hemisphere
22.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 30.0
2449
Male, age 74, both hemispheres
32.2
2359
Male, age 61, both hemispheres
31.9
2161
Male, age 80, both hemispheres
30.0
1959
Male, age 76, both hemispheres
29.0
2840
Female, age 85, both hemispheres
28.8
2456
Female, age 91, both hemispheres
28.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
