HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:32.2 nTPM
GTEx:10.4 nTPM
FANTOM5:18.9 Scaled Tags Per Million
Mouse:38.9 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.0
1898 Male, age 80, left hemisphere 29.4
2621 Female, age 67, right hemisphere 24.9
2148 Female, age 91, left hemisphere 23.5
1855 Male, age 76, left hemisphere 22.4
1911 Female, age 85, right hemisphere 16.0
2529 Female, age 94, left hemisphere 15.9
Dentate gyrus
nTPM: 25.8
1927 Female, age 91, both hemispheres 32.3
2531 Female, age 67, both hemispheres 28.2
2010 Male, age 76, both hemispheres 25.1
2528 Male, age 74, both hemispheres 24.3
2246 Female, age 85, both hemispheres 22.8
2530 Female, age 94, left hemisphere 22.3
Entorhinal gyrus
nTPM: 25.9
2613 Female, age 94, left hemisphere 31.8
2764 Male, age 80, right hemisphere 29.3
1787 Male, age 76, left hemisphere 28.0
1938 Female, age 85, left hemisphere 27.2
2686 Male, age 75, right hemisphere 21.7
2117 Female, age 91, right hemisphere 17.3
Hippocampus, CA1
nTPM: 26.8
2749 Male, age 80, left hemisphere 35.8
2045 Male, age 76, both hemispheres 29.5
1873 Female, age 85, both hemispheres 24.7
2082 Female, age 91, right hemisphere 23.8
2527 Male, age 74, both hemispheres 20.1
Hippocampus, CA2
nTPM: 24.5
1892 Male, age 76, both hemispheres 35.0
2249 Male, age 74, both hemispheres 28.8
1963 Male, age 80, left hemisphere 25.6
2437 Female, age 94, left hemisphere 20.9
2113 Female, age 91, right hemisphere 19.6
1940 Female, age 85, left hemisphere 16.9
Hippocampus, CA3
nTPM: 27.5
2620 Female, age 94, left hemisphere 41.0
2137 Male, age 80, left hemisphere 29.2
1867 Male, age 76, both hemispheres 27.5
2861 Female, age 67, both hemispheres 25.7
1891 Female, age 85, both hemispheres 21.0
2436 Male, age 74, both hemispheres 20.9
Parahippocampal cortex
nTPM: 25.0
1850 Male, age 80, both hemispheres 30.4
1990 Female, age 91, right hemisphere 29.3
2693 Female, age 94, both hemispheres 27.7
2532 Female, age 72, left hemisphere 26.6
2250 Female, age 67, right hemisphere 25.8
1933 Female, age 85, both hemispheres 25.3
2245 Female, age 91, both hemispheres 24.4
2622 Female, age 67, right hemisphere 21.6
2018 Male, age 76, both hemispheres 21.2
2692 Male, age 74, both hemispheres 17.8
Perirhinal gyrus
nTPM: 32.2
1847 Female, age 91, left hemisphere 39.1
1794 Male, age 80, right hemisphere 32.7
2848 Male, age 76, right hemisphere 30.9
1841 Female, age 85, right hemisphere 29.1
2521 Female, age 94, right hemisphere 29.1
Subiculum
nTPM: 20.8
1977 Female, age 85, both hemispheres 26.9
1901 Male, age 80, both hemispheres 22.4
2619 Male, age 74, both hemispheres 20.5
2438 Female, age 94, left hemisphere 19.1
2042 Male, age 76, both hemispheres 18.6
2729 Female, age 91, right hemisphere 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 22.4
Min nTPM: 1.0
Std nTPM: 4.8
Median nTPM: 10.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 22.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 19.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 19.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 19.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 18.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.9
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 15.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 43.7
Min nTPM: 35.8
Sample A Male 39.8
Sample B Male 43.7
Sample C Female 35.8
Sample D Female 36.5
Hippocampal formation
nTPM: 35.8
Samples: 4

Max nTPM: 39.6
Min nTPM: 32.9
Sample A Male 34.1
Sample B Male 39.6
Sample C Female 36.6
Sample D Female 32.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
70787432 Antisense, RP_050706_04_C01, Mouse strain C57BL/6J (56 days, male) 3.8

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