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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4391.5
nTPM
Monaco:
3609.3
nTPM
Schmiedel:
4928.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4391.5
HPA sample
nTPM
gdT-cell nTPM: 521.7
Samples: 6
Max nTPM: 688.5
Min nTPM: 367.4
P10809_1007
367.4
P10809_1022
585.2
P10809_1041
688.5
P10809_1060
462.5
P10809_1077
476.9
P10809_1098
549.7
MAIT T-cell nTPM: 2127.4
Samples: 6
Max nTPM: 2411.4
Min nTPM: 1976.0
P10809_1006
2096.8
P10809_1024
2411.4
P10809_1043
2104.7
P10809_1062
1976.0
P10809_1083
2163.5
P10809_1097
2012.2
Memory CD4 T-cell nTPM: 2948.4
Samples: 6
Max nTPM: 3526.7
Min nTPM: 2455.7
P10809_1014
2455.7
P10809_1026
3131.9
P10809_1045
3526.7
P10809_1064
2718.6
P10809_1086
3015.0
P10809_1113
2842.3
Memory CD8 T-cell nTPM: 2508.6
Samples: 5
Max nTPM: 2738.5
Min nTPM: 2288.3
P10809_1012
2288.3
P10809_1027
2405.0
P10809_1046
2738.5
P10809_1065
2520.0
P10809_1111
2591.2
Naive CD4 T-cell nTPM: 2680.8
Samples: 6
Max nTPM: 3920.7
Min nTPM: 1971.5
P10809_1015
1971.5
P10809_1030
2783.1
P10809_1049
3920.7
P10809_1068
2449.9
P10809_1085
2479.4
P10809_1112
2480.1
Naive CD8 T-cell nTPM: 2394.9
Samples: 6
Max nTPM: 3046.7
Min nTPM: 1753.2
P10809_1016
1753.2
P10809_1031
2279.5
P10809_1050
2834.1
P10809_1069
3046.7
P10809_1087
2230.3
P10809_1110
2225.5
T-reg nTPM: 4391.5
Samples: 6
Max nTPM: 5810.3
Min nTPM: 3211.4
P10809_1018
3211.4
P10809_1037
4237.5
P10809_1056
5810.3
P10809_1075
3812.1
P10809_1094
4892.3
P10809_1106
4385.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3609.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2768.4
Samples: 4
Max nTPM: 3330.0
Min nTPM: 1840.3
RHH5202_R3573
3330.0
RHH5230_R3602
2819.8
RHH5259_R3631
1840.3
RHH5288_R3660
3083.4
Effector memory CD8 T-cell nTPM: 3368.1
Samples: 4
Max nTPM: 3889.6
Min nTPM: 2462.2
RHH5203_R3574
3508.1
RHH5231_R3603
3889.6
RHH5260_R3632
2462.2
RHH5289_R3661
3612.6
MAIT T-cell nTPM: 2435.5
Samples: 4
Max nTPM: 2883.5
Min nTPM: 2120.5
RHH5233_R3605
2883.5
RHH5205_R3576
2120.5
RHH5262_R3634
2577.2
RHH5297_R3663
2160.6
Memory CD4 T-cell TFH nTPM: 3609.4
Samples: 4
Max nTPM: 4362.3
Min nTPM: 3188.3
RHH5300_R3666
3283.2
RHH5236_R3608
4362.3
RHH5265_R3637
3188.3
RHH5208_R3579
3603.6
Memory CD4 T-cell Th1 nTPM: 2814.9
Samples: 4
Max nTPM: 3467.9
Min nTPM: 2362.3
RHH5210_R3581
2958.7
RHH5302_R3668
3467.9
RHH5238_R3610
2362.3
RHH5267_R3639
2470.5
Memory CD4 T-cell Th1/Th17 nTPM: 3096.9
Samples: 4
Max nTPM: 4134.9
Min nTPM: 1920.6
RHH5303_R3669
4134.9
RHH5211_R3582
3873.1
RHH5239_R3611
1920.6
RHH5268_R3640
2459.0
Memory CD4 T-cell Th17 nTPM: 2798.6
Samples: 4
Max nTPM: 3418.2
Min nTPM: 2092.6
RHH5304_R3670
2909.7
RHH5212_R3583
3418.2
RHH5240_R3612
2773.7
RHH5269_R3641
2092.6
Memory CD4 T-cell Th2 nTPM: 2929.9
Samples: 4
Max nTPM: 3466.3
Min nTPM: 2497.3
RHH5305_R3671
2977.4
RHH5213_R3584
2778.4
RHH5241_R3613
3466.3
RHH5270_R3642
2497.3
Naive CD4 T-cell nTPM: 2763.2
Samples: 4
Max nTPM: 3091.5
Min nTPM: 2249.8
RHH5306_R3672
2749.6
RHH5214_R3585
2961.8
RHH5242_R3614
3091.5
RHH5271_R3643
2249.8
Naive CD8 T-cell nTPM: 2330.7
Samples: 4
Max nTPM: 2839.9
Min nTPM: 1561.4
RHH5201_R3572
2839.9
RHH5229_R3601
1561.4
RHH5258_R3630
2461.0
RHH5287_R3659
2460.5
Non-Vd2 gdTCR nTPM: 497.1
Samples: 4
Max nTPM: 607.7
Min nTPM: 390.6
RHH5235_R3607
535.4
RHH5264_R3636
454.7
RHH5207_R3578
390.6
RHH5299_R3665
607.7
T-reg nTPM: 3274.3
Samples: 4
Max nTPM: 4351.2
Min nTPM: 2598.9
RHH5301_R3667
3282.9
RHH5237_R3609
4351.2
RHH5266_R3638
2598.9
RHH5209_R3580
2864.1
Terminal effector memory CD4 T-cell nTPM: 2649.0
Samples: 2
Max nTPM: 3272.2
Min nTPM: 2025.8
RHH5243_R3615
3272.2
RHH5272_R3644
2025.8
Terminal effector memory CD8 T-cell nTPM: 2813.9
Samples: 4
Max nTPM: 3715.7
Min nTPM: 1835.8
RHH5232_R3604
3715.7
RHH5204_R3575
2995.7
RHH5261_R3633
1835.8
RHH5296_R3662
2708.5
Vd2 gdTCR nTPM: 1029.1
Samples: 4
Max nTPM: 1254.9
Min nTPM: 836.7
RHH5234_R3606
1052.7
RHH5206_R3577
972.1
RHH5263_R3635
836.7
RHH5298_R3664
1254.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.